BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem212b21 (1926 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 826 0.0 gb|AAP83927.1| Rubisco activase alpha form precursor [Deschampsi... 817 0.0 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 809 0.0 gb|AAF71272.1|AF251264_1 ribulose bisphosphate carboxylase activ... 781 0.0 emb|CAO15686.1| unnamed protein product [Vitis vinifera] 777 0.0 >sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) dbj|BAA97583.1| RuBisCO activase large isoform precursor [Oryza sativa (japonica cultivar-group)] dbj|BAC78572.1| ribulose-bisphosphate carboxylase activase large isoform precursor protein [Oryza sativa (japonica cultivar-group)] gb|ABA95522.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] gb|EAZ19330.1| hypothetical protein OsJ_033539 [Oryza sativa (japonica cultivar-group)] Length = 466 Score = 826 bits (2133), Expect = 0.0 Identities = 409/464 (88%), Positives = 438/464 (94%), Gaps = 3/464 (0%) Frame = +3 Query: 279 FSSTVGAPASTPSSFLGNKLKK--TSAVNCYHGRQPNLNSRFVRVMAAKDLDEGKQTDKD 452 FSSTVGAPASTP++FLG KLKK TSAVN YHG+ N+N RF +VMA K+LDEGKQTD+D Sbjct: 5 FSSTVGAPASTPTNFLGKKLKKQVTSAVN-YHGKSSNIN-RF-KVMA-KELDEGKQTDQD 60 Query: 453 RWKGLAYDISDDQQDITRGKGLVDSLFQGPMGDGTHEAVLSSYEYISQGLRQYNFDNTMG 632 RWKGLAYDISDDQQDITRGKG VDSLFQ P GDGTHEAVLSSYEY+SQGLR Y+FDNTMG Sbjct: 61 RWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMG 120 Query: 633 GLYIAPAFMDKLVVHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 812 G YIAPAFMDKLVVHI+KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM Sbjct: 121 GFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 180 Query: 813 SAGELESGNAGEPAKLIRQRYREAADIISKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 992 SAGELESGNAGEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 181 SAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 240 Query: 993 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 1172 VNATLMNIADNPTNVQLPGMYNK++NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300 Query: 1173 EDRIGVCKGIFRTDNVPDEAIVKLVDTFPGQSIDFFGALRARVYDDEVRRWVAEVGVENI 1352 +DR+GVCKGIFRTDNVPDE IVK+VD+FPGQSIDFFGALRARVYDDEVR+WV++ GVENI Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360 Query: 1353 GKRLVNSREGPPTFEQPKMTLEKLLEYGHMLVREQENVKRVQLADKYLSEAALGDANDDA 1532 GKRLVNSREGPP FEQPKMT+EKL+EYG+MLV+EQENVKRVQLA++YLSEAALGDAN DA Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420 Query: 1533 MKMGSFYGKAAQQVG-VPVPEGCTDQNAANYDPTARSDDGSCVY 1661 MK GSFYG+ AQQ G +PVPEGCTD A N+DPTARSDDGSC+Y Sbjct: 421 MKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLY 464 >gb|AAP83927.1| Rubisco activase alpha form precursor [Deschampsia antarctica] Length = 465 Score = 817 bits (2110), Expect = 0.0 Identities = 400/463 (86%), Positives = 433/463 (93%), Gaps = 2/463 (0%) Frame = +3 Query: 279 FSSTVGAPASTPSSFLGNKLKK--TSAVNCYHGRQPNLNSRFVRVMAAKDLDEGKQTDKD 452 FSSTVGAPASTP+SFLGNKLKK TSAVN YHG+ N RF + AKD+DEGKQTD D Sbjct: 5 FSSTVGAPASTPTSFLGNKLKKQVTSAVN-YHGKSFKAN-RFT--VMAKDIDEGKQTDGD 60 Query: 453 RWKGLAYDISDDQQDITRGKGLVDSLFQGPMGDGTHEAVLSSYEYISQGLRQYNFDNTMG 632 +WKGLAYDISDDQQDITRGKG+VDSLFQ PMGDGTHEAVLSSYEY+SQGL++Y+FDNTMG Sbjct: 61 KWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAVLSSYEYVSQGLKKYDFDNTMG 120 Query: 633 GLYIAPAFMDKLVVHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 812 G YIAPAFMDKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMM Sbjct: 121 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 180 Query: 813 SAGELESGNAGEPAKLIRQRYREAADIISKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 992 SAGELESGNAGEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 181 SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 240 Query: 993 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 1172 VNATLMNIAD PTNVQLPGMYNK+ENPRVPI VTGNDFSTLYAPLI DGRMEKFYWAPTR Sbjct: 241 VNATLMNIADAPTNVQLPGMYNKEENPRVPIXVTGNDFSTLYAPLIPDGRMEKFYWAPTR 300 Query: 1173 EDRIGVCKGIFRTDNVPDEAIVKLVDTFPGQSIDFFGALRARVYDDEVRRWVAEVGVENI 1352 EDRIGVCKGIF+TDNV DE++VK+VDTFPGQSIDFFGALRARVYDDEVR+WV+ G+ENI Sbjct: 301 EDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVSSTGIENI 360 Query: 1353 GKRLVNSREGPPTFEQPKMTLEKLLEYGHMLVREQENVKRVQLADKYLSEAALGDANDDA 1532 GKRLVNSR+GP TFEQPKMT+EKLLEYGHMLV+EQ+NVKRVQLAD Y+S+AALGDAN DA Sbjct: 361 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANKDA 420 Query: 1533 MKMGSFYGKAAQQVGVPVPEGCTDQNAANYDPTARSDDGSCVY 1661 MK GSFYGK AQQ +PVPEGCTD++A N+DPTARSDDGSC+Y Sbjct: 421 MKTGSFYGKGAQQGTLPVPEGCTDRDAKNFDPTARSDDGSCLY 463 >sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) gb|AAA63164.1| ribulose 1,5-bisphosphate carboxylase activase isoform 2 [Hordeum vulgare subsp. vulgare] Length = 464 Score = 809 bits (2089), Expect = 0.0 Identities = 398/463 (85%), Positives = 430/463 (92%), Gaps = 2/463 (0%) Frame = +3 Query: 279 FSSTVGAPASTPSSFLGNKLKK--TSAVNCYHGRQPNLNSRFVRVMAAKDLDEGKQTDKD 452 FSSTVGAPASTP++FLG KLKK TSAVN YHG+ N RF VMAA+++DE + TDK Sbjct: 5 FSSTVGAPASTPTNFLGKKLKKQVTSAVN-YHGKSSKAN-RFT-VMAAENIDEKRNTDK- 60 Query: 453 RWKGLAYDISDDQQDITRGKGLVDSLFQGPMGDGTHEAVLSSYEYISQGLRQYNFDNTMG 632 WKGLAYDISDDQQDITRGKG+VDSLFQ P G GTHEAVLSSYEY+SQGLR+Y+FDNTMG Sbjct: 61 -WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMG 119 Query: 633 GLYIAPAFMDKLVVHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 812 G YIAPAFMDKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMM Sbjct: 120 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 179 Query: 813 SAGELESGNAGEPAKLIRQRYREAADIISKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 992 SAGELESGNAGEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 180 SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 239 Query: 993 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 1172 VNATLMNIAD PTNVQLPGMYNK+ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 240 VNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 299 Query: 1173 EDRIGVCKGIFRTDNVPDEAIVKLVDTFPGQSIDFFGALRARVYDDEVRRWVAEVGVENI 1352 +DRIGVCKGIF+TDNV DE++VK+VDTFPGQSIDFFGALRARVYDDEVR+WV G+ENI Sbjct: 300 DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENI 359 Query: 1353 GKRLVNSREGPPTFEQPKMTLEKLLEYGHMLVREQENVKRVQLADKYLSEAALGDANDDA 1532 GKRLVNSR+GP TFEQPKMT+EKLLEYGHMLV+EQ+NVKRVQLAD Y+S+AALGDAN DA Sbjct: 360 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDA 419 Query: 1533 MKMGSFYGKAAQQVGVPVPEGCTDQNAANYDPTARSDDGSCVY 1661 MK GSFYGK AQQ +PVPEGCTDQNA NYDPTARSDDGSC+Y Sbjct: 420 MKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 462 >gb|AAF71272.1|AF251264_1 ribulose bisphosphate carboxylase activase B [Triticum aestivum] Length = 432 Score = 781 bits (2016), Expect = 0.0 Identities = 383/429 (89%), Positives = 407/429 (94%), Gaps = 2/429 (0%) Frame = +3 Query: 279 FSSTVGAPASTPSSFLGNKLKKTS-AVNCYHGRQPNLNSRFVRVMAAK-DLDEGKQTDKD 452 FSSTVGAPASTP++FLG K+KK + A+N YHG +N+R VR MAAK +LDEGKQTD D Sbjct: 5 FSSTVGAPASTPTTFLGKKVKKQAGALNYYHGGN-KINNRVVRAMAAKKELDEGKQTDAD 63 Query: 453 RWKGLAYDISDDQQDITRGKGLVDSLFQGPMGDGTHEAVLSSYEYISQGLRQYNFDNTMG 632 RWKGLAYDISDDQQDITRGKG+VDSLFQ PMGDGTHEA+LSSYEYISQGLR+Y+FDNTM Sbjct: 64 RWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMD 123 Query: 633 GLYIAPAFMDKLVVHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 812 GLYIAPAFMDKL+VH+AKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM Sbjct: 124 GLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 183 Query: 813 SAGELESGNAGEPAKLIRQRYREAADIISKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 992 SAGELESGNAGEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 184 SAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 243 Query: 993 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 1172 VNATLMNIAD PTNVQ PGMYNK+ENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 244 VNATLMNIADAPTNVQFPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 303 Query: 1173 EDRIGVCKGIFRTDNVPDEAIVKLVDTFPGQSIDFFGALRARVYDDEVRRWVAEVGVENI 1352 EDRIGVCKGIFRTDNVPDEA+V+LVDTFPGQSIDFFGALRARVYDDEVR+WV E+GVENI Sbjct: 304 EDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENI 363 Query: 1353 GKRLVNSREGPPTFEQPKMTLEKLLEYGHMLVREQENVKRVQLADKYLSEAALGDANDDA 1532 KRLVNSREGPPTF+QPKMT+EKL+EYGHMLV+EQENVKRVQLADKYLSEAALG ANDDA Sbjct: 364 SKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDA 423 Query: 1533 MKMGSFYGK 1559 M G+FYGK Sbjct: 424 MATGAFYGK 432 >emb|CAO15686.1| unnamed protein product [Vitis vinifera] Length = 474 Score = 777 bits (2006), Expect = 0.0 Identities = 385/457 (84%), Positives = 415/457 (90%), Gaps = 1/457 (0%) Frame = +3 Query: 294 GAPASTPSS-FLGNKLKKTSAVNCYHGRQPNLNSRFVRVMAAKDLDEGKQTDKDRWKGLA 470 G AS PSS FLGN LKK S+ + P +S +V+A ++DE KQT KD+WKGLA Sbjct: 22 GTGASVPSSAFLGNSLKKVSSKIAH----PRTSSGNFKVVA--EVDEEKQTSKDKWKGLA 75 Query: 471 YDISDDQQDITRGKGLVDSLFQGPMGDGTHEAVLSSYEYISQGLRQYNFDNTMGGLYIAP 650 +D SDDQQDITRGKG+VDSLFQ PM GTH AV+SSY+YIS GLRQYN DNTM G YIAP Sbjct: 76 FDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAP 135 Query: 651 AFMDKLVVHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 830 AFMDKLVVHI KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE Sbjct: 136 AFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 195 Query: 831 SGNAGEPAKLIRQRYREAADIISKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 1010 SGNAGEPAKLIRQRYREAADII KGKMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATLM Sbjct: 196 SGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLM 255 Query: 1011 NIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGV 1190 NIADNPTNVQLPGMYNK+ENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGV Sbjct: 256 NIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGV 315 Query: 1191 CKGIFRTDNVPDEAIVKLVDTFPGQSIDFFGALRARVYDDEVRRWVAEVGVENIGKRLVN 1370 C GIFR+DN+P E +VKLVDTFPGQSIDFFGALRARVYDDEVR+WVA VGVE IGK+LVN Sbjct: 316 CTGIFRSDNIPKEDMVKLVDTFPGQSIDFFGALRARVYDDEVRKWVASVGVEGIGKKLVN 375 Query: 1371 SREGPPTFEQPKMTLEKLLEYGHMLVREQENVKRVQLADKYLSEAALGDANDDAMKMGSF 1550 S+EGPPTFE+PKMTL+KLLEYG+MLV+EQENVKRVQLADKYLSEAALGDAN+DA+K GSF Sbjct: 376 SKEGPPTFEKPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAIKSGSF 435 Query: 1551 YGKAAQQVGVPVPEGCTDQNAANYDPTARSDDGSCVY 1661 YGKAAQQV +PVPEGCTD +A N+DPTARSDDGSC+Y Sbjct: 436 YGKAAQQVNLPVPEGCTDPSANNFDPTARSDDGSCLY 472