BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem210n11 (1928 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001047956.1| Os02g0720900 [Oryza sativa (japonica cultiva... 744 0.0 gb|EAZ00649.1| hypothetical protein OsI_021881 [Oryza sativa (in... 645 0.0 dbj|BAD62387.1| putative 41 kD chloroplast nucleoid DNA binding ... 645 0.0 dbj|BAD12880.1| putative chloroplast nucleoid DNA-binding protei... 593 e-167 gb|EAZ36752.1| hypothetical protein OsJ_020235 [Oryza sativa (ja... 580 e-164 >ref|NP_001047956.1| Os02g0720900 [Oryza sativa (japonica cultivar-group)] dbj|BAD12879.1| putative chloroplast nucleoid DNA-binding protein cnd41 [Oryza sativa (japonica cultivar-group)] dbj|BAD12999.1| putative chloroplast nucleoid DNA-binding protein cnd41 [Oryza sativa (japonica cultivar-group)] dbj|BAF09870.1| Os02g0720900 [Oryza sativa (japonica cultivar-group)] gb|EAY87325.1| hypothetical protein OsI_008558 [Oryza sativa (indica cultivar-group)] Length = 458 Score = 744 bits (1920), Expect = 0.0 Identities = 375/425 (88%), Positives = 401/425 (94%), Gaps = 3/425 (0%) Frame = +2 Query: 116 DFQHLNSSGLHLELHHPRSPCSPAPLPADLPFSAVLTHDDARIASFAARLAKTPSARPTS 295 DFQ+LNS+GLHLELHHPRSPCSPAP+PADLPF+AVLTHDDARI+S AARLAKTPSAR TS Sbjct: 34 DFQYLNSTGLHLELHHPRSPCSPAPVPADLPFTAVLTHDDARISSLAARLAKTPSARATS 93 Query: 296 LDR-ADA--AGSLASVPLSPGKSVGVGNYVTRMGLGTPAKSYVMVVDTGSSLTWLQCSPC 466 LD ADA AGSLASVPLSPG SVGVGNYVTRMGLGTPA YVMVVDTGSSLTWLQCSPC Sbjct: 94 LDADADAGLAGSLASVPLSPGASVGVGNYVTRMGLGTPATQYVMVVDTGSSLTWLQCSPC 153 Query: 467 IVSCHRQAGPVFNPKTSSTYASVSCSSSQCNDLTSATLNRAACSSSNVCIYQASYGDSSF 646 +VSCHRQ+GPVFNPK+SSTYASV CS+ QC+DL SATLN +ACSSSNVCIYQASYGDSSF Sbjct: 154 LVSCHRQSGPVFNPKSSSTYASVGCSAQQCSDLPSATLNPSACSSSNVCIYQASYGDSSF 213 Query: 647 SVGYLSKDTVSFGSKSMPNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLYQLAPSLGNSF 826 SVGYLSKDTVSFGS S+PNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLYQLAPSLG SF Sbjct: 214 SVGYLSKDTVSFGSTSLPNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLYQLAPSLGYSF 273 Query: 827 SYCLPTSSSSGYLSIGSYNPGQYSYTPMVSSSLDDSLYFIKLAGITVAGRSLAVSSSEYS 1006 +YCLP+SSSSGYLS+GSYNPGQYSYTPMVSSSLDDSLYFIKL+G+TVAG L+VSSS YS Sbjct: 274 TYCLPSSSSSGYLSLGSYNPGQYSYTPMVSSSLDDSLYFIKLSGMTVAGNPLSVSSSAYS 333 Query: 1007 SLPTIIDSGTVITRLPTSVYSALSKAVAGAMKGTPRASAYSILDTCFKGRASQLRVPAVS 1186 SLPTIIDSGTVITRLPTSVYSALSKAVA AMKGT RASAYSILDTCFKG+AS++ PAV+ Sbjct: 334 SLPTIIDSGTVITRLPTSVYSALSKAVAAAMKGTSRASAYSILDTCFKGQASRVSAPAVT 393 Query: 1187 LAFAGGAVLKLSARNLLVDVDSSTTCLAFAPARSAAIIGNTQQQTFSVVYDVKSNRIGFA 1366 ++FAGGA LKLSA+NLLVDVD STTCLAFAPARSAAIIGNTQQQTFSVVYDVKS+RIGFA Sbjct: 394 MSFAGGAALKLSAQNLLVDVDDSTTCLAFAPARSAAIIGNTQQQTFSVVYDVKSSRIGFA 453 Query: 1367 AGGCS 1381 AGGCS Sbjct: 454 AGGCS 458 >gb|EAZ00649.1| hypothetical protein OsI_021881 [Oryza sativa (indica cultivar-group)] Length = 469 Score = 645 bits (1664), Expect = 0.0 Identities = 330/437 (75%), Positives = 364/437 (83%), Gaps = 14/437 (3%) Frame = +2 Query: 113 ADFQHLNSSGLHLELHHPRSPCSPAPLPADLPFSAVLTHDDARIASFAARLAKTPSARPT 292 +DFQHLNSSGLHL LHHP+SPCSPAPLP+DLPFSAV+THDDARIA A+RLA P+ Sbjct: 33 SDFQHLNSSGLHLTLHHPQSPCSPAPLPSDLPFSAVVTHDDARIAHLASRLANNHPTSPS 92 Query: 293 SLD-----RADAAG-------SLASVPLSPGKSVGVGNYVTRMGLGTPAKSYVMVVDTGS 436 S R AG S +SVPL+PG SV VGNYVTR+GLGTPA SYVMVVDTGS Sbjct: 93 SSSLLHGHRKKKAGGVGGSQASSSSVPLTPGASVAVGNYVTRLGLGTPATSYVMVVDTGS 152 Query: 437 SLTWLQCSPCIVSCHRQAGPVFNPKTSSTYASVSCSSSQCNDLTSATLNRAACSSSNVCI 616 SLTWLQCSPC VSCHRQAGPVF+P+ S TYA+V CSSS+C +L +ATLN +ACS SNVCI Sbjct: 153 SLTWLQCSPCSVSCHRQAGPVFDPRASGTYAAVQCSSSECGELQAATLNPSACSVSNVCI 212 Query: 617 YQASYGDSSFSVGYLSKDTVSFGSKSMPNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLY 796 YQASYGDSS+SVGYLSKDTVSFGS S P FYYGCGQDNEGLFGRSAGLIGLA+NKLSLLY Sbjct: 213 YQASYGDSSYSVGYLSKDTVSFGSGSFPGFYYGCGQDNEGLFGRSAGLIGLAKNKLSLLY 272 Query: 797 QLAPSLGNSFSYCLPTSS-SSGYLSIGSYNPGQYSYTPMVSSSLDDSLYFIKLAGITVAG 973 QLAPSLG +FSYCLPTSS ++GYLSIGSYNPGQYSYTPM SSSLD SLYF+ L+GI+VAG Sbjct: 273 QLAPSLGYAFSYCLPTSSAAAGYLSIGSYNPGQYSYTPMASSSLDASLYFVTLSGISVAG 332 Query: 974 RSLAVSSSEYSSLPTIIDSGTVITRLPTSVYSALSKAVAGAMKG-TPRASAYSILDTCFK 1150 LAV SEY SLPTIIDSGTVITRLP +VY+ALS+AVA A+ G PRA YSILDTCF+ Sbjct: 333 APLAVPPSEYRSLPTIIDSGTVITRLPPNVYTALSRAVAAAIAGAAPRAPTYSILDTCFR 392 Query: 1151 GRASQLRVPAVSLAFAGGAVLKLSARNLLVDVDSSTTCLAFAPARSAAIIGNTQQQTFSV 1330 G A+ LRVP V +AFAGGA L LS N+L+DVD STTCLAFAP AIIGNTQQQTFSV Sbjct: 393 GSAAGLRVPRVDMAFAGGATLALSPGNVLIDVDDSTTCLAFAPTGGTAIIGNTQQQTFSV 452 Query: 1331 VYDVKSNRIGFAAGGCS 1381 VYDV +RIGFAAGGCS Sbjct: 453 VYDVAQSRIGFAAGGCS 469 >dbj|BAD62387.1| putative 41 kD chloroplast nucleoid DNA binding protein [Oryza sativa (japonica cultivar-group)] Length = 469 Score = 645 bits (1663), Expect = 0.0 Identities = 330/437 (75%), Positives = 363/437 (83%), Gaps = 14/437 (3%) Frame = +2 Query: 113 ADFQHLNSSGLHLELHHPRSPCSPAPLPADLPFSAVLTHDDARIASFAARLAKTPSARPT 292 +DFQHLNSSGLHL LHHP+SPCSPAPLP+DLPFSAV+THDDARIA A+RLA P+ Sbjct: 33 SDFQHLNSSGLHLTLHHPQSPCSPAPLPSDLPFSAVVTHDDARIAHLASRLANNHPTSPS 92 Query: 293 SLD-----RADAAG-------SLASVPLSPGKSVGVGNYVTRMGLGTPAKSYVMVVDTGS 436 S R AG S +SVPL+PG SV VGNYVTR+GLGTPA SYVMVVDTGS Sbjct: 93 SSSLLHGHRKKKAGGVGGSQASSSSVPLTPGASVAVGNYVTRLGLGTPATSYVMVVDTGS 152 Query: 437 SLTWLQCSPCIVSCHRQAGPVFNPKTSSTYASVSCSSSQCNDLTSATLNRAACSSSNVCI 616 SLTWLQCSPC VSCHRQAGPVF+P+ S TYA+V CSSS+C +L +ATLN +ACS SNVCI Sbjct: 153 SLTWLQCSPCSVSCHRQAGPVFDPRASGTYAAVQCSSSECGELQAATLNPSACSVSNVCI 212 Query: 617 YQASYGDSSFSVGYLSKDTVSFGSKSMPNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLY 796 YQASYGDSS+SVGYLSKDTVSFGS S P FYYGCGQDNEGLFGRSAGLIGLA+NKLSLLY Sbjct: 213 YQASYGDSSYSVGYLSKDTVSFGSGSFPGFYYGCGQDNEGLFGRSAGLIGLAKNKLSLLY 272 Query: 797 QLAPSLGNSFSYCLPTSS-SSGYLSIGSYNPGQYSYTPMVSSSLDDSLYFIKLAGITVAG 973 QLAPSLG +FSYCLPTSS ++GYLSIGSYNPGQYSYTPM SSSLD SLYF+ L+GI+VAG Sbjct: 273 QLAPSLGYAFSYCLPTSSAAAGYLSIGSYNPGQYSYTPMASSSLDASLYFVTLSGISVAG 332 Query: 974 RSLAVSSSEYSSLPTIIDSGTVITRLPTSVYSALSKAVAGAM-KGTPRASAYSILDTCFK 1150 LAV SEY SLPTIIDSGTVITRLP +VY+ALS+AVA AM PRA YSILDTCF+ Sbjct: 333 APLAVPPSEYRSLPTIIDSGTVITRLPPNVYTALSRAVAAAMASAAPRAPTYSILDTCFR 392 Query: 1151 GRASQLRVPAVSLAFAGGAVLKLSARNLLVDVDSSTTCLAFAPARSAAIIGNTQQQTFSV 1330 G A+ LRVP V +AFAGGA L LS N+L+DVD STTCLAFAP AIIGNTQQQTFSV Sbjct: 393 GSAAGLRVPRVDMAFAGGATLALSPGNVLIDVDDSTTCLAFAPTGGTAIIGNTQQQTFSV 452 Query: 1331 VYDVKSNRIGFAAGGCS 1381 VYDV +RIGFAAGGCS Sbjct: 453 VYDVAQSRIGFAAGGCS 469 >dbj|BAD12880.1| putative chloroplast nucleoid DNA-binding protein cnd41 [Oryza sativa (japonica cultivar-group)] dbj|BAD13000.1| putative chloroplast nucleoid DNA-binding protein cnd41 [Oryza sativa (japonica cultivar-group)] Length = 333 Score = 593 bits (1529), Expect = e-167 Identities = 295/333 (88%), Positives = 316/333 (94%) Frame = +2 Query: 383 MGLGTPAKSYVMVVDTGSSLTWLQCSPCIVSCHRQAGPVFNPKTSSTYASVSCSSSQCND 562 MGLGTPA YVMVVDTGSSLTWLQCSPC+VSCHRQ+GPVFNPK+SSTYASV CS+ QC+D Sbjct: 1 MGLGTPATQYVMVVDTGSSLTWLQCSPCLVSCHRQSGPVFNPKSSSTYASVGCSAQQCSD 60 Query: 563 LTSATLNRAACSSSNVCIYQASYGDSSFSVGYLSKDTVSFGSKSMPNFYYGCGQDNEGLF 742 L SATLN +ACSSSNVCIYQASYGDSSFSVGYLSKDTVSFGS S+PNFYYGCGQDNEGLF Sbjct: 61 LPSATLNPSACSSSNVCIYQASYGDSSFSVGYLSKDTVSFGSTSLPNFYYGCGQDNEGLF 120 Query: 743 GRSAGLIGLARNKLSLLYQLAPSLGNSFSYCLPTSSSSGYLSIGSYNPGQYSYTPMVSSS 922 GRSAGLIGLARNKLSLLYQLAPSLG SF+YCLP+SSSSGYLS+GSYNPGQYSYTPMVSSS Sbjct: 121 GRSAGLIGLARNKLSLLYQLAPSLGYSFTYCLPSSSSSGYLSLGSYNPGQYSYTPMVSSS 180 Query: 923 LDDSLYFIKLAGITVAGRSLAVSSSEYSSLPTIIDSGTVITRLPTSVYSALSKAVAGAMK 1102 LDDSLYFIKL+G+TVAG L+VSSS YSSLPTIIDSGTVITRLPTSVYSALSKAVA AMK Sbjct: 181 LDDSLYFIKLSGMTVAGNPLSVSSSAYSSLPTIIDSGTVITRLPTSVYSALSKAVAAAMK 240 Query: 1103 GTPRASAYSILDTCFKGRASQLRVPAVSLAFAGGAVLKLSARNLLVDVDSSTTCLAFAPA 1282 GT RASAYSILDTCFKG+AS++ PAV+++FAGGA LKLSA+NLLVDVD STTCLAFAPA Sbjct: 241 GTSRASAYSILDTCFKGQASRVSAPAVTMSFAGGAALKLSAQNLLVDVDDSTTCLAFAPA 300 Query: 1283 RSAAIIGNTQQQTFSVVYDVKSNRIGFAAGGCS 1381 RSAAIIGNTQQQTFSVVYDVKS+RIGFAAGGCS Sbjct: 301 RSAAIIGNTQQQTFSVVYDVKSSRIGFAAGGCS 333 >gb|EAZ36752.1| hypothetical protein OsJ_020235 [Oryza sativa (japonica cultivar-group)] Length = 434 Score = 580 bits (1496), Expect = e-164 Identities = 302/436 (69%), Positives = 333/436 (76%), Gaps = 13/436 (2%) Frame = +2 Query: 113 ADFQHLNSSGLHLELHHPRSPCSPAPLPADLPFSAVLTHDDARIASFAARLAKTPSARPT 292 +DFQHLNSSGLHL LHHP+SPCSPAPLP+DLPFSAV+THDDARIA A+RLA P+ Sbjct: 33 SDFQHLNSSGLHLTLHHPQSPCSPAPLPSDLPFSAVVTHDDARIAHLASRLANNHPTSPS 92 Query: 293 SLD-----RADAAG-------SLASVPLSPGKSVGVGNYVTRMGLGTPAKSYVMVVDTGS 436 S R AG S +SVPL+PG SV VGNYVTR+GLGTPA SYVMVVDTGS Sbjct: 93 SSSLLHGHRKKKAGGVGGSQASSSSVPLTPGASVAVGNYVTRLGLGTPATSYVMVVDTGS 152 Query: 437 SLTWLQCSPCIVSCHRQAGPVFNPKTSSTYASVSCSSSQCNDLTSATLNRAACSSSNVCI 616 SLTWLQCSPC VSCHRQAGPVF+P+ S TYA+V CSSS+C +L +ATLN +ACS SNVCI Sbjct: 153 SLTWLQCSPCSVSCHRQAGPVFDPRASGTYAAVQCSSSECGELQAATLNPSACSVSNVCI 212 Query: 617 YQASYGDSSFSVGYLSKDTVSFGSKSMPNFYYGCGQDNEGLFGRSAGLIGLARNKLSLLY 796 YQASYGDSS+SVGYLSKDTVSFGS S P FYYGCGQDNEGLFGRSAGLIGLA+NKLSLLY Sbjct: 213 YQASYGDSSYSVGYLSKDTVSFGSGSFPGFYYGCGQDNEGLFGRSAGLIGLAKNKLSLLY 272 Query: 797 QLAPSLGNSFSYCLPTSS-SSGYLSIGSYNPGQYSYTPMVSSSLDDSLYFIKLAGITVAG 973 QLAPSLG +FSYCLPTSS ++GYLSIGSYNPGQYSYTPM SSSLD SLYF+ L+GI+VAG Sbjct: 273 QLAPSLGYAFSYCLPTSSAAAGYLSIGSYNPGQYSYTPMASSSLDASLYFVTLSGISVAG 332 Query: 974 RSLAVSSSEYSSLPTIIDSGTVITRLPTSVYSALSKAVAGAMKGTPRASAYSILDTCFKG 1153 LAV S+ PRA YSILDTCF+G Sbjct: 333 APLAVPPSD----------------------------------AAPRAPTYSILDTCFRG 358 Query: 1154 RASQLRVPAVSLAFAGGAVLKLSARNLLVDVDSSTTCLAFAPARSAAIIGNTQQQTFSVV 1333 A+ LRVP V +AFAGGA L LS N+L+DVD STTCLAFAP AIIGNTQQQTFSVV Sbjct: 359 SAAGLRVPRVDMAFAGGATLALSPGNVLIDVDDSTTCLAFAPTGGTAIIGNTQQQTFSVV 418 Query: 1334 YDVKSNRIGFAAGGCS 1381 YDV +RIGFAAGGCS Sbjct: 419 YDVAQSRIGFAAGGCS 434