BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem208p18
         (1562 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066352.1| Os12g0194800 [Oryza sativa (japonica cultiva...   624   e-177
emb|CAO46965.1| unnamed protein product [Vitis vinifera]              469   e-130
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       428   e-118
ref|NP_172451.2| tRNA pseudouridine synthase family protein [Ara...   428   e-118
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] >...   428   e-118

>ref|NP_001066352.1| Os12g0194800 [Oryza sativa (japonica cultivar-group)]
 gb|ABA96079.2| tRNA pseudouridine synthase family protein, putative, expressed
            [Oryza sativa (japonica cultivar-group)]
 dbj|BAF29371.1| Os12g0194800 [Oryza sativa (japonica cultivar-group)]
          Length = 391

 Score =  624 bits (1610), Expect = e-177
 Identities = 322/384 (83%), Positives = 330/384 (85%), Gaps = 1/384 (0%)
 Frame = +1

Query: 76   KRPFDPSLGDTEGDPSPPSKLQRSSQPDPSPP-EKSDSAADGGKAVAGVESEAMAGARNP 252
            KRP DPS      DPSP +KLQRSS PDPSPP E    A DGG  VAGV S  MAGARNP
Sbjct: 13   KRPIDPS----HADPSPAAKLQRSSPPDPSPPAEAQGDATDGGGEVAGVRSGEMAGARNP 68

Query: 253  RAQRYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDVGVHALS 432
            +AQRYLVAVEYVGTRFSGSQQQ NQRTVVGVLEEAFHKFIGQPVSIFCSSRTD GVHALS
Sbjct: 69   QAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDTGVHALS 128

Query: 433  NVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRSVAPDFHARYKA 612
            NVCHVDVERISKRKPGE+LPPHEPGVVKRAVNHFLQKNEGDIMVTDVR VAPDFHARYKA
Sbjct: 129  NVCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAPDFHARYKA 188

Query: 613  LERTYHYRLLSGPEPLSVFEKNSAWHITEDLNAQAMKKACSILVGHHDFSSFRAAGCQAN 792
            LERTYHYRLLSG EPLSVFEK SAWHI EDLN QAMKKACSILVGHHDFSSFRA GCQAN
Sbjct: 189  LERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSFRATGCQAN 248

Query: 793  SPMRTLDELTVTEVFPSMFFPSSLERSEMESLDGSLVYSRTLVMEXXXXXXXXXXXXXXX 972
            SPMRTLDEL+VTEVFPSMFFPSS+ERSEMESLDG LVYSRT V+E               
Sbjct: 249  SPMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVE-SSGKGSDASSTSEQ 307

Query: 973  XXXXXXQEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDITTADVERILNSKT 1152
                  +EFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGD+TT DVERILN K 
Sbjct: 308  SRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERILNLKA 367

Query: 1153 VTAAPPMAPACGLYLANVKYDLSV 1224
            VTAAPPMAPACGLYLANVKYDLSV
Sbjct: 368  VTAAPPMAPACGLYLANVKYDLSV 391


>emb|CAO46965.1| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  469 bits (1206), Expect = e-130
 Identities = 247/378 (65%), Positives = 283/378 (74%), Gaps = 3/378 (0%)
 Frame = +1

Query: 94   SLGDTEGDPSPPSKLQRSSQPD--PSPPEKSDSAADGGKAVAGVESEAMAGARNPRAQRY 267
            S+ ++    SP   L R S+    PS   ++D  +DG +  + V S+ M   +NPR QRY
Sbjct: 8    SISESARSDSPKHLLNRRSESPQRPSKIARTDDLSDGEQQDS-VASKTMT--QNPRVQRY 64

Query: 268  LVAVEYVGTRFSGSQQQPNQRTVVGVLEEAFHKFIGQPVSIFCSSRTDVGVHALSNVCHV 447
            LVAVEY+GTRFSGSQQQ N RTV G L+EAFHKFIGQPVSIFCSSRTD GVHALSNVCHV
Sbjct: 65   LVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHV 124

Query: 448  DVERISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRSVAPDFHARYKALERTY 627
            DVERISKRKPGEVLPPHEP VV+RAVNHFLQKNEGD+MV DVR V PDFHARYKA ERTY
Sbjct: 125  DVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKARERTY 184

Query: 628  HYRLLSGPEPLSVFEKNSAWHITEDLNAQAMKKACSILVGHHDFSSFRAAGCQANSPMRT 807
             YRLLSGPEPLS FEK+ AWH+ EDL+  AM+KAC +LVG HDFSSFRAAGCQA SP+RT
Sbjct: 185  FYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKSPIRT 244

Query: 808  LDELTVTEVFPSMFFPSSLERSEME-SLDGSLVYSRTLVMEXXXXXXXXXXXXXXXXXXX 984
            LDEL V+EV P+ +FPS  ER++   + +  L  S    +                    
Sbjct: 245  LDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDGFNGAG- 303

Query: 985  XXQEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDITTADVERILNSKTVTAA 1164
              Q FG R RHRCF+VTARARSFLYHQVRL+VG++K VGTGD+T +DVERILN+KTVTAA
Sbjct: 304  --QGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAA 361

Query: 1165 PPMAPACGLYLANVKYDL 1218
             PMAPACGLYL NV YDL
Sbjct: 362  SPMAPACGLYLGNVNYDL 379


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  428 bits (1100), Expect = e-118
 Identities = 216/346 (62%), Positives = 258/346 (74%)
 Frame = +1

Query: 178  SDSAADGGKAVAGVESEAMAGARNPRAQRYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEA 357
            SD  ++  + +A +ES       NPR QRYLVA+EY+GTRFSGSQQQ   RTVVGVL+EA
Sbjct: 31   SDEESEEQQGLADLES---MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEA 87

Query: 358  FHKFIGQPVSIFCSSRTDVGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFL 537
            FHKFIGQPV IFCSSRTD GVHALSNVCHVDVERISKRKPGEVLPPHEPGVV+RAVNHFL
Sbjct: 88   FHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFL 147

Query: 538  QKNEGDIMVTDVRSVAPDFHARYKALERTYHYRLLSGPEPLSVFEKNSAWHITEDLNAQA 717
            Q+ +GD+MV DVR V  ++HARYKA ERTY YRLLSG +PLS+ EK+  WH+ E+LN + 
Sbjct: 148  QRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRF 207

Query: 718  MKKACSILVGHHDFSSFRAAGCQANSPMRTLDELTVTEVFPSMFFPSSLERSEMESLDGS 897
            M++AC +LVG HDFSSFRAAGCQA SPMR+LDEL +TEV  + +FPS  ER+     +G 
Sbjct: 208  MQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGD 267

Query: 898  LVYSRTLVMEXXXXXXXXXXXXXXXXXXXXXQEFGKRLRHRCFVVTARARSFLYHQVRLM 1077
             +       +                       FG+R RHRC+VVTAR+R FLYHQVRL+
Sbjct: 268  PLACSN---QPKSETAGVTTNVGEVEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLI 324

Query: 1078 VGLLKSVGTGDITTADVERILNSKTVTAAPPMAPACGLYLANVKYD 1215
            VG LK VGTG++T +DVERIL +KTV+AA PMAPA GLYLA V+Y+
Sbjct: 325  VGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLARVRYE 370


>ref|NP_172451.2| tRNA pseudouridine synthase family protein [Arabidopsis thaliana]
          Length = 372

 Score =  428 bits (1100), Expect = e-118
 Identities = 216/346 (62%), Positives = 258/346 (74%)
 Frame = +1

Query: 178  SDSAADGGKAVAGVESEAMAGARNPRAQRYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEA 357
            SD  ++  + +A +ES       NPR QRYLVA+EY+GTRFSGSQQQ   RTVVGVL+EA
Sbjct: 31   SDEESEEQQGLADLES---MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEA 87

Query: 358  FHKFIGQPVSIFCSSRTDVGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFL 537
            FHKFIGQPV IFCSSRTD GVHALSNVCHVDVERISKRKPGEVLPPHEPGVV+RAVNHFL
Sbjct: 88   FHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFL 147

Query: 538  QKNEGDIMVTDVRSVAPDFHARYKALERTYHYRLLSGPEPLSVFEKNSAWHITEDLNAQA 717
            Q+ +GD+MV DVR V  ++HARYKA ERTY YRLLSG +PLS+ EK+  WH+ E+LN + 
Sbjct: 148  QRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRF 207

Query: 718  MKKACSILVGHHDFSSFRAAGCQANSPMRTLDELTVTEVFPSMFFPSSLERSEMESLDGS 897
            M++AC +LVG HDFSSFRAAGCQA SPMR+LDEL +TEV  + +FPS  ER+     +G 
Sbjct: 208  MQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGD 267

Query: 898  LVYSRTLVMEXXXXXXXXXXXXXXXXXXXXXQEFGKRLRHRCFVVTARARSFLYHQVRLM 1077
             +       +                       FG+R RHRC+VVTAR+R FLYHQVRL+
Sbjct: 268  PLACSN---QPKSETAGVTTNVGEVEGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLI 324

Query: 1078 VGLLKSVGTGDITTADVERILNSKTVTAAPPMAPACGLYLANVKYD 1215
            VG LK VGTG++T +DVERIL +KTV+AA PMAPA GLYLA V+Y+
Sbjct: 325  VGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLARVRYE 370


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
 dbj|BAD44451.1| unnamed protein product [Arabidopsis thaliana]
          Length = 368

 Score =  428 bits (1100), Expect = e-118
 Identities = 216/346 (62%), Positives = 258/346 (74%)
 Frame = +1

Query: 178  SDSAADGGKAVAGVESEAMAGARNPRAQRYLVAVEYVGTRFSGSQQQPNQRTVVGVLEEA 357
            SD  ++  + +A +ES       NPR QRYLVA+EY+GTRFSGSQQQ   RTVVGVL+EA
Sbjct: 27   SDEESEEQQGLADLES---MNPVNPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEA 83

Query: 358  FHKFIGQPVSIFCSSRTDVGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFL 537
            FHKFIGQPV IFCSSRTD GVHALSNVCHVDVERISKRKPGEVLPPHEPGVV+RAVNHFL
Sbjct: 84   FHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFL 143

Query: 538  QKNEGDIMVTDVRSVAPDFHARYKALERTYHYRLLSGPEPLSVFEKNSAWHITEDLNAQA 717
            Q+ +GD+MV DVR V  ++HARYKA ERTY YRLLSG +PLS+ EK+  WH+ E+LN + 
Sbjct: 144  QRKDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRF 203

Query: 718  MKKACSILVGHHDFSSFRAAGCQANSPMRTLDELTVTEVFPSMFFPSSLERSEMESLDGS 897
            M++AC +LVG HDFSSFRAAGCQA SPMR+LDEL +TEV  + +FPS  ER+     +G 
Sbjct: 204  MQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGD 263

Query: 898  LVYSRTLVMEXXXXXXXXXXXXXXXXXXXXXQEFGKRLRHRCFVVTARARSFLYHQVRLM 1077
             +       +                       FG+R RHRC+VVTAR+R FLYHQVRL+
Sbjct: 264  PLACSN---QPKSETAGVTTNVGEVEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLI 320

Query: 1078 VGLLKSVGTGDITTADVERILNSKTVTAAPPMAPACGLYLANVKYD 1215
            VG LK VGTG++T +DVERIL +KTV+AA PMAPA GLYLA V+Y+
Sbjct: 321  VGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLARVRYE 366