BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem205f01 (1629 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001050738.1| Os03g0639700 [Oryza sativa (japonica cultiva... 742 0.0 gb|AAT85291.1| DNA repair protein recA, putative [Oryza sativa (... 630 e-179 gb|AAA32855.1| replicase 602 e-170 ref|NP_565198.1| DNA repair protein recA [Arabidopsis thaliana] ... 602 e-170 dbj|BAF49678.1| RecA [Physcomitrella patens] 533 e-149 >ref|NP_001050738.1| Os03g0639700 [Oryza sativa (japonica cultivar-group)] gb|ABF97819.1| DNA repair protein recA, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF12652.1| Os03g0639700 [Oryza sativa (japonica cultivar-group)] Length = 418 Score = 742 bits (1916), Expect = 0.0 Identities = 386/412 (93%), Positives = 391/412 (94%), Gaps = 6/412 (1%) Frame = +3 Query: 117 AASARLAPA-LLPRPRRSALAP----RASASGLAGRGRRLRCEFVAGGGNGALSGEDDPR 281 AAS+R PA LLPR RR AP RA+A G GRGRRLRCEFVAGGGNGALSGEDDPR Sbjct: 7 AASSRFGPAHLLPRSRRKGRAPAPSARATACGAVGRGRRLRCEFVAGGGNGALSGEDDPR 66 Query: 282 LIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVE 461 LIDRQKALDAAMNDIN+SFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVE Sbjct: 67 LIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVE 126 Query: 462 VYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGE 641 VYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGE Sbjct: 127 VYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGE 186 Query: 642 MALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS 821 MALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS Sbjct: 187 MALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS 246 Query: 822 KAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSIGKIKSAKGDEDVGVK 1001 KAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR IGKIKSAKGDEDVGVK Sbjct: 247 KAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSAKGDEDVGVK 306 Query: 1002 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDTRLGQG 1181 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYK+ RLGQG Sbjct: 307 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMRLGQG 366 Query: 1182 REKTLQYLRESPIICDEIEKAVRAMIPEGTRHMSLLAFGQSS-TEEEQVYDE 1334 REK LQYLRESP ICDEIEKAVRAMIPEG RHMSLLAFG+SS TEEEQV DE Sbjct: 367 REKALQYLRESPTICDEIEKAVRAMIPEGARHMSLLAFGRSSLTEEEQVDDE 418 >gb|AAT85291.1| DNA repair protein recA, putative [Oryza sativa (japonica cultivar-group)] Length = 395 Score = 630 bits (1625), Expect = e-179 Identities = 345/430 (80%), Positives = 350/430 (81%), Gaps = 24/430 (5%) Frame = +3 Query: 117 AASARLAPA-LLPRPRRSALAP----RASASGLAGRGRRLRCEFVAGGGNGALSGEDDPR 281 AAS+R PA LLPR RR AP RA+A G GRGRRLRCEFVAGGGNGALSGEDDPR Sbjct: 7 AASSRFGPAHLLPRSRRKGRAPAPSARATACGAVGRGRRLRCEFVAGGGNGALSGEDDPR 66 Query: 282 LIDR------------------QKALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGC 407 LIDR QKALDAAMNDIN+SFGKGSVTRLGSAGGAFVETFPSGC Sbjct: 67 LIDRRQECNRGFRATNMNNNVMQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGC 126 Query: 408 LTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSK 587 LTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSK Sbjct: 127 LTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSK 186 Query: 588 ALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMG 767 ALGVDIENLI GEIGMQQMG Sbjct: 187 ALGVDIENLI-----------------------------------------GEIGMQQMG 205 Query: 768 LQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEI 947 LQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEI Sbjct: 206 LQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEI 265 Query: 948 RSIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEV 1127 R IGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEV Sbjct: 266 RPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEV 325 Query: 1128 VAKKGSWYSYKDTRLGQGREKTLQYLRESPIICDEIEKAVRAMIPEGTRHMSLLAFGQSS 1307 VAKKGSWYSYK+ RLGQGREK LQYLRESP ICDEIEKAVRAMIPEG RHMSLLAFG+SS Sbjct: 326 VAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMSLLAFGRSS 385 Query: 1308 -TEEEQVYDE 1334 TEEEQV DE Sbjct: 386 LTEEEQVDDE 395 >gb|AAA32855.1| replicase Length = 438 Score = 602 bits (1552), Expect = e-170 Identities = 306/369 (82%), Positives = 331/369 (89%), Gaps = 7/369 (1%) Frame = +3 Query: 249 NGALSGEDDPRLIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFAL 428 NGALS + D R +DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETF SG LTLD AL Sbjct: 68 NGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLAL 127 Query: 429 GGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIE 608 GGGLPKGRVVE+YGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD+E Sbjct: 128 GGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVE 187 Query: 609 NLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 788 NLIVCQPDNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMS Sbjct: 188 NLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 247 Query: 789 QALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSIGKIK 968 QALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRS GKIK Sbjct: 248 QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIK 307 Query: 969 SAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSW 1148 S+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+MEVV KKGSW Sbjct: 308 SSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSW 367 Query: 1149 YSYKDTRLGQGREKTLQYLRESPIICDEIEKAVRAMIPEGTRHMSLLAFGQSST------ 1310 YSY+D RLGQGREK LQ+LRE+P + DEIEK VR ++ +G H S SS+ Sbjct: 368 YSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSSSSASHRE 427 Query: 1311 -EEEQVYDE 1334 EEE D+ Sbjct: 428 EEEEDSLDD 436 >ref|NP_565198.1| DNA repair protein recA [Arabidopsis thaliana] sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplast precursor (Recombinase A homolog 1) gb|AAA61781.1| DNA repair protein gb|AAC17051.1| Match to nuclear-encoded chloroplast DNA repair protein (E. coli recA homolog) gb|L15229. [Arabidopsis thaliana] gb|AAK92822.1| putative replicase [Arabidopsis thaliana] gb|AAM45008.1| putative replicase [Arabidopsis thaliana] Length = 439 Score = 602 bits (1552), Expect = e-170 Identities = 306/369 (82%), Positives = 331/369 (89%), Gaps = 7/369 (1%) Frame = +3 Query: 249 NGALSGEDDPRLIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFAL 428 NGALS + D R +DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETF SG LTLD AL Sbjct: 69 NGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLAL 128 Query: 429 GGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIE 608 GGGLPKGRVVE+YGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD+E Sbjct: 129 GGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVE 188 Query: 609 NLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 788 NLIVCQPDNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMS Sbjct: 189 NLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 248 Query: 789 QALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSIGKIK 968 QALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRS GKIK Sbjct: 249 QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIK 308 Query: 969 SAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSW 1148 S+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+MEVV KKGSW Sbjct: 309 SSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSW 368 Query: 1149 YSYKDTRLGQGREKTLQYLRESPIICDEIEKAVRAMIPEGTRHMSLLAFGQSST------ 1310 YSY+D RLGQGREK LQ+LRE+P + DEIEK VR ++ +G H S SS+ Sbjct: 369 YSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSSSSASHRE 428 Query: 1311 -EEEQVYDE 1334 EEE D+ Sbjct: 429 EEEEDSLDD 437 >dbj|BAF49678.1| RecA [Physcomitrella patens] Length = 460 Score = 533 bits (1372), Expect = e-149 Identities = 259/333 (77%), Positives = 299/333 (89%) Frame = +3 Query: 267 EDDPRLIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPK 446 +D + +DRQKAL+AAM+DIN SFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGG PK Sbjct: 92 DDQLQYVDRQKALEAAMSDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGFPK 151 Query: 447 GRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQ 626 GR+VE++GPESSGKTTLALHAIAE+QK GGNAMLVDAEH FDP YSKALGVD+E+LIVCQ Sbjct: 152 GRIVEIFGPESSGKTTLALHAIAEIQKKGGNAMLVDAEHCFDPYYSKALGVDVESLIVCQ 211 Query: 627 PDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 806 PDNGEMALE ADRMCRSGA+D+I IDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM Sbjct: 212 PDNGEMALETADRMCRSGAVDIIVIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 271 Query: 807 SGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSIGKIKSAKGDE 986 S NA++A CT++FLNQIRYKI V YGNPEVTSGG+ALKFFAS+RL+IR+ GKIKS +G++ Sbjct: 272 SANAARANCTIIFLNQIRYKIAVMYGNPEVTSGGLALKFFASLRLDIRNTGKIKSPRGED 331 Query: 987 DVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDT 1166 D+G++ RVRVQKSKVSRPYKQAEF+IIFGEG+ KLG +LD AE + VV +KG+WYSY +T Sbjct: 332 DIGIRARVRVQKSKVSRPYKQAEFDIIFGEGICKLGSLLDSAETVGVVVRKGAWYSYGET 391 Query: 1167 RLGQGREKTLQYLRESPIICDEIEKAVRAMIPE 1265 RLGQGR+K +Q+LR+ P +C +IEK VR I E Sbjct: 392 RLGQGRDKVVQFLRDYPEVCADIEKVVRERIAE 424