BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem204a21
         (2288 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044971.1| Os01g0876800 [Oryza sativa (japonica cultiva...   386   e-105
emb|CAN73746.1| hypothetical protein [Vitis vinifera]                 287   1e-77
emb|CAO44510.1| unnamed protein product [Vitis vinifera]              287   6e-77
gb|ABK24496.1| unknown [Picea sitchensis]                             226   2e-58
ref|NP_973958.1| RNA recognition motif (RRM)-containing protein ...   201   2e-49

>ref|NP_001044971.1| Os01g0876800 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD81881.1| putative RRM-containing protein SEB-4 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF06885.1| Os01g0876800 [Oryza sativa (japonica cultivar-group)]
 gb|EAY76689.1| hypothetical protein OsI_004536 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ14353.1| hypothetical protein OsJ_004178 [Oryza sativa (japonica
           cultivar-group)]
          Length = 300

 Score =  386 bits (991), Expect = e-105
 Identities = 191/231 (82%), Positives = 193/231 (83%), Gaps = 6/231 (2%)
 Frame = +1

Query: 172 MSPPSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYG 351
           MSPPSV+GQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYG
Sbjct: 1   MSPPSVIGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYG 60

Query: 352 FVTFRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPLTPQHGGTRSFRVMKSFSXX 531
           FVTFRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRP TPQHGG RSFRVMKSFS  
Sbjct: 61  FVTFRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPPTPQHGGARSFRVMKSFSQQ 120

Query: 532 XXXXXXXXXXFPSHATFPHYAIPQGLPYHVXXXXXXXXXXXXXXXXXNIYGGAQYPFYG- 708
                     FPSHATFPHYAIPQGLPYHV                 NIYGGAQYPFYG 
Sbjct: 121 AGIQGGLGAAFPSHATFPHYAIPQGLPYHVYGYSPYSPDYSYPTNYYNIYGGAQYPFYGA 180

Query: 709 -----GAAAGMVTGTSPFYPYFQFGQSGSTTTNYASGQGYNLQYPQMFHFS 846
                 AAAGMVTG+SPFYPYFQFGQSGSTTTNYASGQGYNLQYPQMFHFS
Sbjct: 181 AAAAAAAAAGMVTGSSPFYPYFQFGQSGSTTTNYASGQGYNLQYPQMFHFS 231



 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 53/82 (64%), Positives = 53/82 (64%)
 Frame = +3

Query: 807  GLQLAIPTDVPLLHVASTAAAVTGFAQQYGGPLSLAASPQAQTGMTMXXXXXXXXXXXXX 986
            G  L  P       VASTAAAVTGFAQQYGGPLSLAASPQAQ GMTM             
Sbjct: 219  GYNLQYPQMFHFSTVASTAAAVTGFAQQYGGPLSLAASPQAQAGMTMALTAPTLPTPTQA 278

Query: 987  XXXYRLIPSHFAVSAALEQPLA 1052
               YRLIPSHFAVSAA EQPLA
Sbjct: 279  AHPYRLIPSHFAVSAAPEQPLA 300


>emb|CAN73746.1| hypothetical protein [Vitis vinifera]
          Length = 269

 Score =  287 bits (734), Expect(2) = 1e-77
 Identities = 146/225 (64%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
 Frame = +1

Query: 172 MSPPSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYG 351
           M+P ++ GQFGDTTYTKVFVGGLAWETQKETM+KYFEQFGEILEAVVITDK TGRSKGYG
Sbjct: 1   MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 352 FVTFRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPLTPQHGGTRSFRVMKSFSXX 531
           FVTFR+PDAAMRACVD APVIDGRRANCNLASLGVQRS+P TP+HGG R+FRVM SF   
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGRNFRVMGSFQ-- 118

Query: 532 XXXXXXXXXXFPSHATFPHYAIPQGLPYHVXXXXXXXXXXXXXXXXXNIYGG--AQYPFY 705
                     FPS ATFPHYAI QG+PY++                 ++YGG  AQYP Y
Sbjct: 119 TGFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVYGGAAAQYPVY 178

Query: 706 GGAAAGMVTGT-SPFYPYFQFGQ---SGSTTTNYASGQGYNLQYP 828
           G    GM+TG  + FYPY QFG+     + +  Y SGQGY +QYP
Sbjct: 179 GAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYP 223



 Score = 29.3 bits (64), Expect(2) = 1e-77
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 876 GFAQQYGGPLSLAASPQAQTG 938
           G+ Q YG P+SLA +P  Q+G
Sbjct: 237 GYPQHYGAPMSLAPTPALQSG 257


>emb|CAO44510.1| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  287 bits (734), Expect(2) = 6e-77
 Identities = 146/225 (64%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
 Frame = +1

Query: 172 MSPPSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYG 351
           M+P ++ GQFGDTTYTKVFVGGLAWETQKETM+KYFEQFGEILEAVVITDK TGRSKGYG
Sbjct: 1   MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 352 FVTFRDPDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPLTPQHGGTRSFRVMKSFSXX 531
           FVTFR+PDAAMRACVD APVIDGRRANCNLASLGVQRS+P TP+HGG R+FRVM SF   
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGRNFRVMGSFQ-- 118

Query: 532 XXXXXXXXXXFPSHATFPHYAIPQGLPYHVXXXXXXXXXXXXXXXXXNIYGG--AQYPFY 705
                     FPS ATFPHYAI QG+PY++                 ++YGG  AQYP Y
Sbjct: 119 TGFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVYGGAAAQYPVY 178

Query: 706 GGAAAGMVTGT-SPFYPYFQFGQ---SGSTTTNYASGQGYNLQYP 828
           G    GM+TG  + FYPY QFG+     + +  Y SGQGY +QYP
Sbjct: 179 GAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYP 223



 Score = 26.9 bits (58), Expect(2) = 6e-77
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 876 GFAQQYGGPLSLAASPQAQT 935
           G+ Q YG P+SLA +P  Q+
Sbjct: 237 GYPQHYGAPMSLAPTPALQS 256


>gb|ABK24496.1| unknown [Picea sitchensis]
          Length = 295

 Score =  226 bits (577), Expect(2) = 2e-58
 Identities = 120/220 (54%), Positives = 139/220 (63%), Gaps = 2/220 (0%)
 Frame = +1

Query: 190 MGQFGDTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYGFVTFRD 369
           MGQFGDTT+TKVFVGGLAWETQKETMR+YFEQFGEILEAVVITDKNTGRSKGYGFVTFRD
Sbjct: 16  MGQFGDTTFTKVFVGGLAWETQKETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRD 75

Query: 370 PDAAMRACVDPAPVIDGRRANCNLASLGVQRSRPLTPQHGGTRSFRVMKSFSXXXXXXXX 549
           P++AMRACVD +P+IDGRRANCNLASLG QRSRP TPQ G    FR++ SF         
Sbjct: 76  PESAMRACVDSSPIIDGRRANCNLASLGAQRSRPSTPQPGS--RFRILGSFPTGLQTGGS 133

Query: 550 XXXXFPSHATFPHYAIPQGL-PYHVXXXXXXXXXXXXXXXXXNIYGGAQYPFYGGAAAGM 726
                 +     HY   QG  PYH                  + YGG  YP      AGM
Sbjct: 134 FYNVGAAFPQPAHYGFQQGFSPYHTYGFSSYSSENTFHPNYYSPYGGPHYPQMYPGPAGM 193

Query: 727 VTGTSPFYPYFQFGQSGSTTTNYASG-QGYNLQYPQMFHF 843
           ++  +  YPYFQ+ Q    +  Y    Q + L +P + H+
Sbjct: 194 ISNPA-LYPYFQYTQPLQGSAGYPQATQNFGLHFPHIMHY 232



 Score = 25.4 bits (54), Expect(2) = 2e-58
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 852 ASTAAAVTGF-AQQYGGPLSLAASPQAQTGMTM 947
           A ++ A++G  AQQYGG LS+  +  + +GMT+
Sbjct: 235 AGSSGAISGLQAQQYGGVLSIPTAVPS-SGMTL 266


>ref|NP_973958.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
           thaliana]
 gb|AAK63994.1| At1g33470/F10C21_14 [Arabidopsis thaliana]
 gb|AAL76151.1| At1g33470/F10C21_14 [Arabidopsis thaliana]
          Length = 244

 Score =  201 bits (511), Expect = 2e-49
 Identities = 115/222 (51%), Positives = 133/222 (59%), Gaps = 8/222 (3%)
 Frame = +1

Query: 205 DTTYTKVFVGGLAWETQKETMRKYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPDAAM 384
           DTT+TKVFVGGLAWET K ++R YFEQFG+I+EAVVITDK++GRSKGYGFVTF DP+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 385 RACVDPAPVIDGRRANCNLASLGVQRSRPLTPQHGGTRSFRVMKSFSXXXXXXXXXXXXF 564
           +ACVDPAPVIDGRRANCNLA+ GVQRS+P +P HG     R MK  S             
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGG-RGMKVTSPFKTHFGTAATAI 121

Query: 565 PSHATFPHYAIPQGLPYHVXXXXXXXXXXXXXXXXXNIYGG--AQYPFYG-----GAAAG 723
           PS   F HY +P   P+                   N+YGG  AQ+P YG     G AA 
Sbjct: 122 PSPLPFSHYTLPYTNPF---GFSSYSMDYNYPTSYYNVYGGATAQHPMYGSGPMTGVAAA 178

Query: 724 MVTGTSPFYPYFQFGQSGSTTTNYASGQGYNLQYP-QMFHFS 846
              G   FYPY QF +     T YA      L YP  MFH+S
Sbjct: 179 PAAG---FYPYLQFAEGNGPVTGYAP-----LHYPNHMFHYS 212