BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem201m24
         (1624 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045380.1| Os01g0945800 [Oryza sativa (japonica cultiva...   621   e-176
dbj|BAD88026.1| RNA-binding like protein [Oryza sativa (japonica...   614   e-174
gb|EAY77190.1| hypothetical protein OsI_005037 [Oryza sativa (in...   605   e-171
dbj|BAB63863.1| putative RNA-binding like protein [Oryza sativa ...   605   e-171
ref|NP_568011.1| RNA recognition motif (RRM)-containing protein ...   437   e-121

>ref|NP_001045380.1| Os01g0945800 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF07294.1| Os01g0945800 [Oryza sativa (japonica cultivar-group)]
          Length = 374

 Score =  621 bits (1602), Expect = e-176
 Identities = 312/369 (84%), Positives = 325/369 (88%), Gaps = 5/369 (1%)
 Frame = +3

Query: 327  SGASGIMATKLMVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFSSA 506
            +GAS IMATKL+VLGIPWDVDTEGLREYM KFGPLDDCVVMKERSSGRSRGFGYVTFSSA
Sbjct: 6    AGASAIMATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSA 65

Query: 507  DDAKNVLDCEHVLGNRTLEVKIATPKEEMKSQGAKKATRIFVARIPQSVDESMFRRHFEA 686
            DDAKNVL+CEHVLGNRTLEVKIATPKEEMKSQG+KKATRIFVARIPQSVDESMFRRHFEA
Sbjct: 66   DDAKNVLECEHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEA 125

Query: 687  FGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQETHELDGTTVVVDRATPKDEDVR 866
            +GEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQ++HELDGTTVVVDRATPKDE+VR
Sbjct: 126  YGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVR 185

Query: 867  YPPSR-TSQGGYGAYNAYISAATRYAALGAPTLYDHP--XXXXXXXXXXXXXXXXKKIFV 1037
            YPPSR  SQGGYGAYNAYISAATRYAALGAPTLYDHP                  KKIFV
Sbjct: 186  YPPSRGASQGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFV 245

Query: 1038 GRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEI 1217
            GRLPQEANT+DLRHYFG+FGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEI
Sbjct: 246  GRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEI 305

Query: 1218 LGHEVAIDTAAPLEGDSSGAYMEPMDLYGAYGSMRSYGRFCXXXXXXXXXXXXXXXXXXT 1397
            LGHEVAIDTAAPLEGDS G YMEPMDLYGAYGSMR+YGRFC                  +
Sbjct: 306  LGHEVAIDTAAPLEGDSGGGYMEPMDLYGAYGSMRTYGRFCSGIDYDYGYGHSGSSSSRS 365

Query: 1398 --DWRHRPY 1418
              DWR+RPY
Sbjct: 366  RADWRYRPY 374


>dbj|BAD88026.1| RNA-binding like protein [Oryza sativa (japonica cultivar-group)]
          Length = 363

 Score =  614 bits (1583), Expect = e-174
 Identities = 308/363 (84%), Positives = 320/363 (88%), Gaps = 5/363 (1%)
 Frame = +3

Query: 345  MATKLMVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 524
            MATKL+VLGIPWDVDTEGLREYM KFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV
Sbjct: 1    MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60

Query: 525  LDCEHVLGNRTLEVKIATPKEEMKSQGAKKATRIFVARIPQSVDESMFRRHFEAFGEITD 704
            L+CEHVLGNRTLEVKIATPKEEMKSQG+KKATRIFVARIPQSVDESMFRRHFEA+GEITD
Sbjct: 61   LECEHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAYGEITD 120

Query: 705  LYMPKEHGSKGHRGIGFITFQSAESVDSIMQETHELDGTTVVVDRATPKDEDVRYPPSR- 881
            LYMPKEHGSKGHRGIGFITFQSAESVDSIMQ++HELDGTTVVVDRATPKDE+VRYPPSR 
Sbjct: 121  LYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRG 180

Query: 882  TSQGGYGAYNAYISAATRYAALGAPTLYDHP--XXXXXXXXXXXXXXXXKKIFVGRLPQE 1055
             SQGGYGAYNAYISAATRYAALGAPTLYDHP                  KKIFVGRLPQE
Sbjct: 181  ASQGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQE 240

Query: 1056 ANTDDLRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVA 1235
            ANT+DLRHYFG+FGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVA
Sbjct: 241  ANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVA 300

Query: 1236 IDTAAPLEGDSSGAYMEPMDLYGAYGSMRSYGRFCXXXXXXXXXXXXXXXXXXT--DWRH 1409
            IDTAAPLEGDS G YMEPMDLYGAYGSMR+YGRFC                  +  DWR+
Sbjct: 301  IDTAAPLEGDSGGGYMEPMDLYGAYGSMRTYGRFCSGIDYDYGYGHSGSSSSRSRADWRY 360

Query: 1410 RPY 1418
            RPY
Sbjct: 361  RPY 363


>gb|EAY77190.1| hypothetical protein OsI_005037 [Oryza sativa (indica
            cultivar-group)]
 gb|EAZ14816.1| hypothetical protein OsJ_004641 [Oryza sativa (japonica
            cultivar-group)]
          Length = 365

 Score =  605 bits (1561), Expect = e-171
 Identities = 302/344 (87%), Positives = 312/344 (90%), Gaps = 12/344 (3%)
 Frame = +3

Query: 345  MATKLMVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 524
            MATKL+VLGIPWDVDTEGLREYM KFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV
Sbjct: 1    MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60

Query: 525  LDCEHVLGNRTLEVKIATPKEEMKSQGAKKATRIFVARIPQSVDESMFRRHFEAFGEITD 704
            L+CEHVLGNRTLEVKIATPKEEMKSQG+KKATRIFVARIPQSVDESMFRRHFEA+GEITD
Sbjct: 61   LECEHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAYGEITD 120

Query: 705  LYMPKEHGSKGHRGIGFITFQSAESVDSIMQETHELDGTTVVVDRATPKDEDVRYPPSR- 881
            LYMPKEHGSKGHRGIGFITFQSAESVDSIMQ++HELDGTTVVVDRATPKDE+VRYPPSR 
Sbjct: 121  LYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRG 180

Query: 882  TSQGGYGAYNAYISAATRYAALGAPTLYDHP-----------XXXXXXXXXXXXXXXXKK 1028
             SQGGYGAYNAYISAATRYAALGAPTLYDHP                           KK
Sbjct: 181  ASQGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGSKSSATKITGGGYYGSSQGMGNKK 240

Query: 1029 IFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRS 1208
            IFVGRLPQEANT+DLRHYFG+FGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRS
Sbjct: 241  IFVGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRS 300

Query: 1209 HEILGHEVAIDTAAPLEGDSSGAYMEPMDLYGAYGSMRSYGRFC 1340
            HEILGHEVAIDTAAPLEGDS G YMEPMDLYGAYGSMR+YGRFC
Sbjct: 301  HEILGHEVAIDTAAPLEGDSGGGYMEPMDLYGAYGSMRTYGRFC 344


>dbj|BAB63863.1| putative RNA-binding like protein [Oryza sativa (japonica
            cultivar-group)]
          Length = 523

 Score =  605 bits (1561), Expect = e-171
 Identities = 304/362 (83%), Positives = 316/362 (87%), Gaps = 5/362 (1%)
 Frame = +3

Query: 348  ATKLMVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVL 527
            A+   VLGIPWDVDTEGLREYM KFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVL
Sbjct: 162  ASSSSVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVL 221

Query: 528  DCEHVLGNRTLEVKIATPKEEMKSQGAKKATRIFVARIPQSVDESMFRRHFEAFGEITDL 707
            +CEHVLGNRTLEVKIATPKEEMKSQG+KKATRIFVARIPQSVDESMFRRHFEA+GEITDL
Sbjct: 222  ECEHVLGNRTLEVKIATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAYGEITDL 281

Query: 708  YMPKEHGSKGHRGIGFITFQSAESVDSIMQETHELDGTTVVVDRATPKDEDVRYPPSR-T 884
            YMPKEHGSKGHRGIGFITFQSAESVDSIMQ++HELDGTTVVVDRATPKDE+VRYPPSR  
Sbjct: 282  YMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGA 341

Query: 885  SQGGYGAYNAYISAATRYAALGAPTLYDHP--XXXXXXXXXXXXXXXXKKIFVGRLPQEA 1058
            SQGGYGAYNAYISAATRYAALGAPTLYDHP                  KKIFVGRLPQEA
Sbjct: 342  SQGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQEA 401

Query: 1059 NTDDLRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAI 1238
            NT+DLRHYFG+FGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAI
Sbjct: 402  NTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAI 461

Query: 1239 DTAAPLEGDSSGAYMEPMDLYGAYGSMRSYGRFCXXXXXXXXXXXXXXXXXXT--DWRHR 1412
            DTAAPLEGDS G YMEPMDLYGAYGSMR+YGRFC                  +  DWR+R
Sbjct: 462  DTAAPLEGDSGGGYMEPMDLYGAYGSMRTYGRFCSGIDYDYGYGHSGSSSSRSRADWRYR 521

Query: 1413 PY 1418
            PY
Sbjct: 522  PY 523


>ref|NP_568011.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
 gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana]
 gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis thaliana]
          Length = 379

 Score =  437 bits (1125), Expect = e-121
 Identities = 232/352 (65%), Positives = 271/352 (76%), Gaps = 22/352 (6%)
 Frame = +3

Query: 345  MATKLMVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 524
            M  KL+VLGIPWD+D++GL++YM+KFG L+DC+VMK+RS+GRSRGFGYVTF+SA+DAKN 
Sbjct: 1    MERKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNA 60

Query: 525  LDCEHVLGNRTLEVKIATPKEEMKSQGAKKATRIFVARIPQSVDESMFRRHFEAFGEITD 704
            L  EH LGNR LEVK+ATPKEEM+ Q AKK TRIFVARIP SV ES FR HFE +GEITD
Sbjct: 61   LKGEHFLGNRILEVKVATPKEEMR-QPAKKVTRIFVARIPSSVSESDFRSHFERYGEITD 119

Query: 705  LYMPKEHGSKGHRGIGFITFQSAESVDSIMQETHELDGTTVVVDRATPKDED--VRYPP- 875
            LYMPK++ SK HRGIGFITF SA+SV+ +M++TH+L GTTV VDRATPK++D   R PP 
Sbjct: 120  LYMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPV 179

Query: 876  SRTSQ------------GGYGAYNAYISAATRYAALGAPTLYDHPXXXXXXXXXXXXXXX 1019
            +R S+            GGYGAY+AYISAATRYAALGAPTLYD+P               
Sbjct: 180  ARMSRPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIG 239

Query: 1020 XKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVA 1199
              KIFVGRLPQEA+ DDLR YFGRFG I DAYIPKDPKRSGHRGFGFVTFA+ GVADRVA
Sbjct: 240  -NKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVA 298

Query: 1200 RRSHEILGHEVAIDTAAPLE--GDSSGA----YMEPMDLYGAYGS-MRSYGR 1334
            RRSHEI G EVAID+A PL+  G S+GA         + +G YG  MR++GR
Sbjct: 299  RRSHEICGQEVAIDSATPLDEAGPSAGASSMLSSSRPEYFGGYGGPMRAFGR 350