BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem201d07
         (1675 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY87323.1| hypothetical protein OsI_008556 [Oryza sativa (in...   330   e-172
ref|NP_001047954.1| Os02g0720600 [Oryza sativa (japonica cultiva...   330   e-172
gb|EAY74910.1| hypothetical protein OsI_002757 [Oryza sativa (in...   294   e-146
ref|NP_001043536.1| Os01g0608300 [Oryza sativa (japonica cultiva...   289   e-146
dbj|BAD52835.1| nucleoid DNA-binding protein cnd41-like [Oryza s...   289   e-146

>gb|EAY87323.1| hypothetical protein OsI_008556 [Oryza sativa (indica
            cultivar-group)]
          Length = 463

 Score =  330 bits (846), Expect(2) = e-172
 Identities = 169/223 (75%), Positives = 185/223 (82%), Gaps = 1/223 (0%)
 Frame = +3

Query: 780  GAATTGSGFNDDQADGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLGAPSG 959
            G +   SGF+D Q DGLMGLGG AQSLVSQTAA YG++FSYCLPPT GSSGFLTLG   G
Sbjct: 242  GCSHLESGFSD-QTDGLMGLGGGAQSLVSQTAAAYGNSFSYCLPPTSGSSGFLTLGGGGG 300

Query: 960  ASGFATTKMLRSRQAPTFYGVHLQGISVAGKQLSVPTSVFV-GSVMDSGTIITRLPPTAY 1136
            ASGF TT+MLRS+Q PTFYG  LQ I+V GKQL +  SVF  GSV+DSGTIITRLPPTAY
Sbjct: 301  ASGFVTTRMLRSKQIPTFYGARLQDIAVGGKQLGLSPSVFAAGSVVDSGTIITRLPPTAY 360

Query: 1137 SALSSAFKDGMKQYPPAQPRSILDTCFDFTGQDNVTIPSVALVFSGGAVVDLDANGIILG 1316
            SALSSAFK GMKQY  A  RSILDTCFDF GQ  ++IP+VALVFSGGA +DLD NGI+ G
Sbjct: 361  SALSSAFKAGMKQYRSAPARSILDTCFDFAGQTQISIPTVALVFSGGAAIDLDPNGIMYG 420

Query: 1317 SCLAFAATDDDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1445
            +CLAFAAT DDGTTGIIGNVQQRTFEVLYDVG S +GFR GAC
Sbjct: 421  NCLAFAATGDDGTTGIIGNVQQRTFEVLYDVGSSTLGFRSGAC 463



 Score =  303 bits (776), Expect(2) = e-172
 Identities = 161/251 (64%), Positives = 187/251 (74%), Gaps = 9/251 (3%)
 Frame = +2

Query: 77  MASVSQMLLLLLCSYHSLIVRAGHEQSYKVLTDTLKPKPVCSEPKVVPSSSGRATVPLNH 256
           MASVS +LLLLLCSYHS++  AG  QSYKVL   L  + VCSE   + SS    TV LNH
Sbjct: 1   MASVSPLLLLLLCSYHSVVAHAGDGQSYKVLE--LNSEAVCSERNAISSSLSGTTVALNH 58

Query: 257 RHGPCSPVPSEKK-PAFAELLRRDQLRAVSVQRKFSKNRA---DGELQQSEVT--VPTTL 418
           RHGPCSPVPS KK P   ELL+RDQLRA  +QRKF+ N A    G+LQQS+V+  VPT L
Sbjct: 59  RHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAVDGAGDLQQSKVSSSVPTKL 118

Query: 419 GSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCNPCPVPPCHSQAGSLFDPSTSST 598
           GSSL TLEYVI+VG+G+ AV QT+TIDTGSDVSWVQCNPCP PPCH+Q G+LFDP+ SST
Sbjct: 119 GSSLDTLEYVISVGLGTPAVTQTVTIDTGSDVSWVQCNPCPNPPCHAQTGALFDPAKSST 178

Query: 599 YAPFSCGSAACAQLGEAGNGC--SDSQCQYIVRYVDGSNTNGTYGSDTLSLT-ESDVVKN 769
           Y   SC +A CAQL + GNGC  ++ +CQY V+Y DGS TNGTY  DTL+L+  SD VK 
Sbjct: 179 YRAVSCAAAECAQLEQQGNGCGATNYECQYGVQYGDGSTTNGTYSRDTLTLSGASDAVKG 238

Query: 770 FQFGCSHHRVG 802
           FQFGCSH   G
Sbjct: 239 FQFGCSHLESG 249


>ref|NP_001047954.1| Os02g0720600 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD12876.1| putative 41 kD chloroplast nucleoid DNA binding protein (CND41)
            [Oryza sativa (japonica cultivar-group)]
 dbj|BAD12996.1| putative 41 kD chloroplast nucleoid DNA binding protein (CND41)
            [Oryza sativa (japonica cultivar-group)]
 dbj|BAF09868.1| Os02g0720600 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ24423.1| hypothetical protein OsJ_007906 [Oryza sativa (japonica
            cultivar-group)]
          Length = 463

 Score =  330 bits (846), Expect(2) = e-172
 Identities = 169/223 (75%), Positives = 184/223 (82%), Gaps = 1/223 (0%)
 Frame = +3

Query: 780  GAATTGSGFNDDQADGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLGAPSG 959
            G +   SGF+D Q DGLMGLGG AQSLVSQTAA YG++FSYCLPPT GSSGFLTLG   G
Sbjct: 242  GCSHVESGFSD-QTDGLMGLGGGAQSLVSQTAAAYGNSFSYCLPPTSGSSGFLTLGGGGG 300

Query: 960  ASGFATTKMLRSRQAPTFYGVHLQGISVAGKQLSVPTSVFV-GSVMDSGTIITRLPPTAY 1136
             SGF TT+MLRSRQ PTFYG  LQ I+V GKQL +  SVF  GSV+DSGTIITRLPPTAY
Sbjct: 301  VSGFVTTRMLRSRQIPTFYGARLQDIAVGGKQLGLSPSVFAAGSVVDSGTIITRLPPTAY 360

Query: 1137 SALSSAFKDGMKQYPPAQPRSILDTCFDFTGQDNVTIPSVALVFSGGAVVDLDANGIILG 1316
            SALSSAFK GMKQY  A  RSILDTCFDF GQ  ++IP+VALVFSGGA +DLD NGI+ G
Sbjct: 361  SALSSAFKAGMKQYRSAPARSILDTCFDFAGQTQISIPTVALVFSGGAAIDLDPNGIMYG 420

Query: 1317 SCLAFAATDDDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1445
            +CLAFAAT DDGTTGIIGNVQQRTFEVLYDVG S +GFR GAC
Sbjct: 421  NCLAFAATGDDGTTGIIGNVQQRTFEVLYDVGSSTLGFRSGAC 463



 Score =  301 bits (770), Expect(2) = e-172
 Identities = 160/251 (63%), Positives = 187/251 (74%), Gaps = 9/251 (3%)
 Frame = +2

Query: 77  MASVSQMLLLLLCSYHSLIVRAGHEQSYKVLTDTLKPKPVCSEPKVVPSSSGRATVPLNH 256
           MASVS +LLLLLCSYHS++  AG  QSYKVL   L  + VCSE   + SS    TV LNH
Sbjct: 1   MASVSPLLLLLLCSYHSVVAHAGDGQSYKVLE--LNSEAVCSERNAISSSLSGTTVALNH 58

Query: 257 RHGPCSPVPSEKK-PAFAELLRRDQLRAVSVQRKFSKNRA---DGELQQSEVT--VPTTL 418
           RHGPCSPVPS KK P   ELL+RDQLRA  +QRKF+ N A    G+LQQS+V+  VPT L
Sbjct: 59  RHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAVDGAGDLQQSKVSSSVPTKL 118

Query: 419 GSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCNPCPVPPCHSQAGSLFDPSTSST 598
           GSSL TLEYVI+VG+G+ AV QT+TIDTGSDVSWVQCNPCP PPC++Q G+LFDP+ SST
Sbjct: 119 GSSLDTLEYVISVGLGTPAVTQTVTIDTGSDVSWVQCNPCPNPPCYAQTGALFDPAKSST 178

Query: 599 YAPFSCGSAACAQLGEAGNGC--SDSQCQYIVRYVDGSNTNGTYGSDTLSLT-ESDVVKN 769
           Y   SC +A CAQL + GNGC  ++ +CQY V+Y DGS TNGTY  DTL+L+  SD VK 
Sbjct: 179 YRAVSCAAAECAQLEQQGNGCGATNYECQYGVQYGDGSTTNGTYSRDTLTLSGASDAVKG 238

Query: 770 FQFGCSHHRVG 802
           FQFGCSH   G
Sbjct: 239 FQFGCSHVESG 249


>gb|EAY74910.1| hypothetical protein OsI_002757 [Oryza sativa (indica
            cultivar-group)]
          Length = 521

 Score =  294 bits (753), Expect(2) = e-146
 Identities = 153/226 (67%), Positives = 179/226 (79%), Gaps = 6/226 (2%)
 Frame = +3

Query: 786  ATTGSGFNDDQADGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLGAPS--- 956
            A  G+G  DD+ DGL+GLGGDAQSLVSQTAA+YG +FSYCLP TP SSGFLTLGAP+   
Sbjct: 297  AELGAGM-DDKTDGLIGLGGDAQSLVSQTAARYGKSFSYCLPATPASSGFLTLGAPASGG 355

Query: 957  --GASGFATTKMLRSRQAPTFYGVHLQGISVAGKQLSVPTSVFV-GSVMDSGTIITRLPP 1127
              GAS FATT MLRS++ PT+Y   L+ I+V GK+L +  SVF  GS++DSGT+ITRLPP
Sbjct: 356  GGGASRFATTPMLRSKKVPTYYFAALEDIAVGGKKLGLSPSVFAAGSLVDSGTVITRLPP 415

Query: 1128 TAYSALSSAFKDGMKQYPPAQPRSILDTCFDFTGQDNVTIPSVALVFSGGAVVDLDANGI 1307
             AY+ALSSAF+ GM +Y  A+P  ILDTCF+FTG D V+IP+VALVF+GGAVVDLDA+GI
Sbjct: 416  AAYAALSSAFRAGMTRYARAEPLGILDTCFNFTGLDKVSIPTVALVFAGGAVVDLDAHGI 475

Query: 1308 ILGSCLAFAATDDDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1445
            + G CLAFA T DD   G IGNVQQRTFEVLYDVG  V GFR GAC
Sbjct: 476  VSGGCLAFAPTRDDKAFGTIGNVQQRTFEVLYDVGGGVFGFRAGAC 521



 Score =  252 bits (644), Expect(2) = e-146
 Identities = 129/212 (60%), Positives = 159/212 (75%), Gaps = 10/212 (4%)
 Frame = +2

Query: 197 CSEPKVVPSSSGRATVPLNHRHGPCSPVP---SEKKPAFAELLRRDQLRAVSVQRKFSKN 367
           C    +  SS G ++V L+HR+GPCSP      EK+P   ELLRRDQLRA  ++RKFS +
Sbjct: 89  CGAATIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEELLRRDQLRADYIRRKFSGS 148

Query: 368 R---ADGELQQSEVTVPTTLGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCNPC 538
               A  + Q S+V+VPTTLGSSL TLEYVI+VG+GS A+ Q + IDTGSDVSWVQC PC
Sbjct: 149 NGTAAGEDGQSSKVSVPTTLGSSLDTLEYVISVGLGSPAMTQRVVIDTGSDVSWVQCEPC 208

Query: 539 PVP-PCHSQAGSLFDPSTSSTYAPFSCGSAACAQLGEAG--NGC-SDSQCQYIVRYVDGS 706
           P P PCH+ AG+LFDP+ SSTYA F+C +AACAQLG++G  NGC + S+CQYIV+Y DGS
Sbjct: 209 PAPSPCHAHAGALFDPAASSTYAAFNCSAAACAQLGDSGEANGCDAKSRCQYIVKYGDGS 268

Query: 707 NTNGTYGSDTLSLTESDVVKNFQFGCSHHRVG 802
           NT GTY SD L+L+ SDVV+ FQFGCSH  +G
Sbjct: 269 NTTGTYSSDVLTLSGSDVVRGFQFGCSHAELG 300


>ref|NP_001043536.1| Os01g0608300 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF05450.1| Os01g0608300 [Oryza sativa (japonica cultivar-group)]
          Length = 492

 Score =  289 bits (739), Expect(2) = e-146
 Identities = 151/226 (66%), Positives = 177/226 (78%), Gaps = 6/226 (2%)
 Frame = +3

Query: 786  ATTGSGFNDDQADGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLGAPS--- 956
            A  G+G  DD+ DGL+GLGGDAQS VSQTAA+YG +F YCLP TP SSGFLTLGAP+   
Sbjct: 268  AELGAGM-DDKTDGLIGLGGDAQSPVSQTAARYGKSFFYCLPATPASSGFLTLGAPASGG 326

Query: 957  --GASGFATTKMLRSRQAPTFYGVHLQGISVAGKQLSVPTSVFV-GSVMDSGTIITRLPP 1127
              GAS FATT MLRS++ PT+Y   L+ I+V GK+L +  SVF  GS++DSGT+ITRLPP
Sbjct: 327  GGGASRFATTPMLRSKKVPTYYFAALEDIAVGGKKLGLSPSVFAAGSLVDSGTVITRLPP 386

Query: 1128 TAYSALSSAFKDGMKQYPPAQPRSILDTCFDFTGQDNVTIPSVALVFSGGAVVDLDANGI 1307
             AY+ALSSAF+ GM +Y  A+P  ILDTCF+FTG D V+IP+VALVF+GGAVVDLDA+GI
Sbjct: 387  AAYAALSSAFRAGMTRYARAEPLGILDTCFNFTGLDKVSIPTVALVFAGGAVVDLDAHGI 446

Query: 1308 ILGSCLAFAATDDDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1445
            + G CLAFA T DD   G IGNVQQRTFEVLYDVG  V GFR GAC
Sbjct: 447  VSGGCLAFAPTRDDKAFGTIGNVQQRTFEVLYDVGGGVFGFRVGAC 492



 Score =  256 bits (654), Expect(2) = e-146
 Identities = 131/214 (61%), Positives = 160/214 (74%), Gaps = 10/214 (4%)
 Frame = +2

Query: 191 PVCSEPKVVPSSSGRATVPLNHRHGPCSPVP---SEKKPAFAELLRRDQLRAVSVQRKFS 361
           P C    +  SS G ++V L+HR+GPCSP      EK+P   ELLRRDQLRA  ++RKFS
Sbjct: 58  PACGAATIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEELLRRDQLRADYIRRKFS 117

Query: 362 KNR---ADGELQQSEVTVPTTLGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCN 532
            +    A  + Q S+V+VPTTLGSSL TLEYVI+VG+GS AV Q + IDTGSDVSWVQC 
Sbjct: 118 GSNGTAAGEDGQSSKVSVPTTLGSSLDTLEYVISVGLGSPAVTQRVVIDTGSDVSWVQCE 177

Query: 533 PCPVP-PCHSQAGSLFDPSTSSTYAPFSCGSAACAQLGEAG--NGC-SDSQCQYIVRYVD 700
           PCP P PCH+ AG+LFDP+ SSTYA F+C +AACAQLG++G  NGC + S+CQYIV+Y D
Sbjct: 178 PCPAPSPCHAHAGALFDPAASSTYAAFNCSAAACAQLGDSGEANGCDAKSRCQYIVKYGD 237

Query: 701 GSNTNGTYGSDTLSLTESDVVKNFQFGCSHHRVG 802
           GSNT GTY SD L+L+ SDVV+ FQFGCSH  +G
Sbjct: 238 GSNTTGTYSSDVLTLSGSDVVRGFQFGCSHAELG 271


>dbj|BAD52835.1| nucleoid DNA-binding protein cnd41-like [Oryza sativa (japonica
            cultivar-group)]
          Length = 452

 Score =  289 bits (739), Expect(2) = e-146
 Identities = 151/226 (66%), Positives = 177/226 (78%), Gaps = 6/226 (2%)
 Frame = +3

Query: 786  ATTGSGFNDDQADGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLGAPS--- 956
            A  G+G  DD+ DGL+GLGGDAQS VSQTAA+YG +F YCLP TP SSGFLTLGAP+   
Sbjct: 228  AELGAGM-DDKTDGLIGLGGDAQSPVSQTAARYGKSFFYCLPATPASSGFLTLGAPASGG 286

Query: 957  --GASGFATTKMLRSRQAPTFYGVHLQGISVAGKQLSVPTSVFV-GSVMDSGTIITRLPP 1127
              GAS FATT MLRS++ PT+Y   L+ I+V GK+L +  SVF  GS++DSGT+ITRLPP
Sbjct: 287  GGGASRFATTPMLRSKKVPTYYFAALEDIAVGGKKLGLSPSVFAAGSLVDSGTVITRLPP 346

Query: 1128 TAYSALSSAFKDGMKQYPPAQPRSILDTCFDFTGQDNVTIPSVALVFSGGAVVDLDANGI 1307
             AY+ALSSAF+ GM +Y  A+P  ILDTCF+FTG D V+IP+VALVF+GGAVVDLDA+GI
Sbjct: 347  AAYAALSSAFRAGMTRYARAEPLGILDTCFNFTGLDKVSIPTVALVFAGGAVVDLDAHGI 406

Query: 1308 ILGSCLAFAATDDDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1445
            + G CLAFA T DD   G IGNVQQRTFEVLYDVG  V GFR GAC
Sbjct: 407  VSGGCLAFAPTRDDKAFGTIGNVQQRTFEVLYDVGGGVFGFRVGAC 452



 Score =  256 bits (654), Expect(2) = e-146
 Identities = 131/214 (61%), Positives = 160/214 (74%), Gaps = 10/214 (4%)
 Frame = +2

Query: 191 PVCSEPKVVPSSSGRATVPLNHRHGPCSPVP---SEKKPAFAELLRRDQLRAVSVQRKFS 361
           P C    +  SS G ++V L+HR+GPCSP      EK+P   ELLRRDQLRA  ++RKFS
Sbjct: 18  PACGAATIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEELLRRDQLRADYIRRKFS 77

Query: 362 KNR---ADGELQQSEVTVPTTLGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCN 532
            +    A  + Q S+V+VPTTLGSSL TLEYVI+VG+GS AV Q + IDTGSDVSWVQC 
Sbjct: 78  GSNGTAAGEDGQSSKVSVPTTLGSSLDTLEYVISVGLGSPAVTQRVVIDTGSDVSWVQCE 137

Query: 533 PCPVP-PCHSQAGSLFDPSTSSTYAPFSCGSAACAQLGEAG--NGC-SDSQCQYIVRYVD 700
           PCP P PCH+ AG+LFDP+ SSTYA F+C +AACAQLG++G  NGC + S+CQYIV+Y D
Sbjct: 138 PCPAPSPCHAHAGALFDPAASSTYAAFNCSAAACAQLGDSGEANGCDAKSRCQYIVKYGD 197

Query: 701 GSNTNGTYGSDTLSLTESDVVKNFQFGCSHHRVG 802
           GSNT GTY SD L+L+ SDVV+ FQFGCSH  +G
Sbjct: 198 GSNTTGTYSSDVLTLSGSDVVRGFQFGCSHAELG 231