BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem127h04 (661 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001056713.1| Os06g0134000 [Oryza sativa (japonica cultiva... 229 1e-58 dbj|BAA02157.1| 40S subunit ribosomal protein [Oryza sativa (jap... 213 6e-54 emb|CAN62522.1| hypothetical protein [Vitis vinifera] 203 8e-51 ref|NP_001064232.1| Os10g0170200 [Oryza sativa (japonica cultiva... 202 2e-50 ref|NP_001049560.1| Os03g0249400 [Oryza sativa (japonica cultiva... 201 2e-50 >ref|NP_001056713.1| Os06g0134000 [Oryza sativa (japonica cultivar-group)] sp|P35686|RS20_ORYSJ 40S ribosomal protein S20 dbj|BAD67888.1| 40S subunit ribosomal protein [Oryza sativa (japonica cultivar-group)] dbj|BAD68866.1| 40S subunit ribosomal protein [Oryza sativa (japonica cultivar-group)] dbj|BAF18627.1| Os06g0134000 [Oryza sativa (japonica cultivar-group)] gb|EAY99540.1| hypothetical protein OsI_020773 [Oryza sativa (indica cultivar-group)] gb|EAZ35731.1| hypothetical protein OsJ_019214 [Oryza sativa (japonica cultivar-group)] Length = 128 Score = 229 bits (583), Expect = 1e-58 Identities = 114/126 (90%), Positives = 119/126 (94%) Frame = +2 Query: 92 AAELAYAPPMKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGP 271 AA++AYAPPMK+GK GFE QE QHRIRITLSSKSVKNLEKVC DLVKGAKDK L+VKGP Sbjct: 3 AADVAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGP 62 Query: 272 VRMPTKVLNITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVE 451 VRMPTKVL+ITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSS DVVKQITSITIEPGVEVE Sbjct: 63 VRMPTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVE 122 Query: 452 VTISDQ 469 VTISDQ Sbjct: 123 VTISDQ 128 >dbj|BAA02157.1| 40S subunit ribosomal protein [Oryza sativa (japonica cultivar-group)] dbj|BAB61063.1| 40S ribosomal protein S20 [Oryza sativa (japonica cultivar-group)] Length = 117 Score = 213 bits (543), Expect = 6e-54 Identities = 107/117 (91%), Positives = 110/117 (94%) Frame = +2 Query: 119 MKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGPVRMPTKVLN 298 MK+GK GFE QE QHRIRITLSSKSVKNLEKVC DLVKGAKDK L+VKGPVRMPTKVL+ Sbjct: 1 MKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLH 60 Query: 299 ITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISDQ 469 ITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSS DVVKQITSITIEPGVEVEVTISDQ Sbjct: 61 ITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISDQ 117 >emb|CAN62522.1| hypothetical protein [Vitis vinifera] Length = 122 Score = 203 bits (516), Expect = 8e-51 Identities = 104/122 (85%), Positives = 112/122 (91%) Frame = +2 Query: 101 LAYAPPMKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGPVRM 280 +AYA MK K G E QEA H+IRITLSSK+VKNLEKVCADLV+GAKDK+LRVKGPVRM Sbjct: 1 MAYAA-MKPTKPGLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRM 59 Query: 281 PTKVLNITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTI 460 PTKVL+ITTRKSPCGEGTNTWDRFE+RVHKRVIDL SSPDVVKQITSITIEPGVEVEVTI Sbjct: 60 PTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 119 Query: 461 SD 466 +D Sbjct: 120 AD 121 >ref|NP_001064232.1| Os10g0170200 [Oryza sativa (japonica cultivar-group)] gb|AAM74244.1|AC074355_6 Putative ribosomal protein S10p/S20e [Oryza sativa (japonica cultivar-group)] gb|AAP52338.1| 40S ribosomal protein S20, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF26146.1| Os10g0170200 [Oryza sativa (japonica cultivar-group)] gb|EAZ15433.1| hypothetical protein OsJ_029642 [Oryza sativa (japonica cultivar-group)] Length = 130 Score = 202 bits (513), Expect = 2e-50 Identities = 105/129 (81%), Positives = 113/129 (87%), Gaps = 3/129 (2%) Frame = +2 Query: 89 MAAELAYAP--PMKAGKAGFEGVQEAQ-HRIRITLSSKSVKNLEKVCADLVKGAKDKQLR 259 MAA Y MK GK G E +E Q +RIRITLSSK+VKNLEKVCADLVKGAKDKQLR Sbjct: 1 MAAAAVYGAGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLR 60 Query: 260 VKGPVRMPTKVLNITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPG 439 VKGPVR+PTKVL+ITTRKSPCGEGTNTWDRFE R+HKRVIDL+SSPDVVKQITSITIEPG Sbjct: 61 VKGPVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPG 120 Query: 440 VEVEVTISD 466 VEVEVTI+D Sbjct: 121 VEVEVTIAD 129 >ref|NP_001049560.1| Os03g0249400 [Oryza sativa (japonica cultivar-group)] gb|ABF94976.1| 40S ribosomal protein S20, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF11474.1| Os03g0249400 [Oryza sativa (japonica cultivar-group)] gb|EAZ26276.1| hypothetical protein OsJ_009759 [Oryza sativa (japonica cultivar-group)] Length = 127 Score = 201 bits (512), Expect = 2e-50 Identities = 105/127 (82%), Positives = 112/127 (88%), Gaps = 1/127 (0%) Frame = +2 Query: 89 MAAELAYAPPMKAGKAGFEGVQEAQ-HRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVK 265 MAA Y MK GK G E E Q +RIRITLSSK+VKNLEKVCADLVKGAKDKQLRVK Sbjct: 1 MAAAAVYGG-MKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVK 59 Query: 266 GPVRMPTKVLNITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVE 445 GPVR+PTKVL+ITTRKSPCGEGTNTWDRFE R+HKRVIDL+SSPDVVKQITSITIEPGVE Sbjct: 60 GPVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVE 119 Query: 446 VEVTISD 466 VEVTI+D Sbjct: 120 VEVTIAD 126