BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem125j03
         (954 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplast precursor (...   218   8e-66
sp|Q9ZP20|TRXM_ORYSJ Thioredoxin M-type, chloroplast precursor (...   202   7e-58
gb|EAY82500.1| hypothetical protein OsI_036459 [Oryza sativa (in...   195   7e-56
ref|NP_001105330.1| thioredoxin M1 [Zea mays] >gi|3334376|sp|Q41...   200   1e-49
emb|CAO60900.1| unnamed protein product [Vitis vinifera]              177   1e-42

>sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplast precursor (Trx-M)
 emb|CAA06735.1| thioredoxin M [Triticum aestivum]
 emb|CAI35908.1| thioredoxin M precursor [Triticum turgidum subsp. durum]
          Length = 175

 Score =  218 bits (555), Expect(2) = 8e-66
 Identities = 99/110 (90%), Positives = 107/110 (97%)
 Frame = +1

Query: 343 IISSVLVADEKNWESMVVACESPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN 522
           ++  V+VADEKNW++MV+ACESPVLVEFWAPWCGPCRMIAPVIDELAK+YVGKIKCCKVN
Sbjct: 66  VVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVN 125

Query: 523 TDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLSTIIDKYLGS 672
           TDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTL TIIDKY+GS
Sbjct: 126 TDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYIGS 175



 Score = 57.8 bits (138), Expect(2) = 8e-66
 Identities = 34/74 (45%), Positives = 40/74 (54%)
 Frame = +2

Query: 101 MALETCFRAWALHAPQAYLGSRDRLLAGXXXXXXXXXXXXXXXXXXXXXXLTAGLITTRR 280
           MALETC R WAL+APQA  G R+RL +G                        + L+  RR
Sbjct: 1   MALETCLRGWALYAPQA--GIRERLSSGSYAPSRPRTAAPAVVSPSPYK---SALVAARR 55

Query: 281 PSRFVSQCKNVVDE 322
           PSRFV +CKNVVDE
Sbjct: 56  PSRFVCKCKNVVDE 69


>sp|Q9ZP20|TRXM_ORYSJ Thioredoxin M-type, chloroplast precursor (Trx-M)
 emb|CAA06736.1| thioredoxin M [Oryza sativa]
 gb|ABA96018.2| Thioredoxin M-type, chloroplast precursor, putative, expressed
           [Oryza sativa (japonica cultivar-group)]
          Length = 172

 Score =  202 bits (513), Expect(2) = 7e-58
 Identities = 93/110 (84%), Positives = 103/110 (93%)
 Frame = +1

Query: 343 IISSVLVADEKNWESMVVACESPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN 522
           ++  V+VADEKNW+SMV+  E+PVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN
Sbjct: 63  VVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN 122

Query: 523 TDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLSTIIDKYLGS 672
           TDD PNIA+ YGIRSIPTVLMFK+GEKKESVIGAVPKTTL+TIIDKY+ S
Sbjct: 123 TDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYVSS 172



 Score = 47.4 bits (111), Expect(2) = 7e-58
 Identities = 35/77 (45%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +2

Query: 101 MALETCFRAWA-LHAPQ--AYLGSRDRLLAGXXXXXXXXXXXXXXXXXXXXXXLTAGLIT 271
           MALETCFRAWA LHAPQ  +  GSRDRLL                          A    
Sbjct: 1   MALETCFRAWATLHAPQPPSSGGSRDRLLLSGAGSSQSKPRLS-----------VASPSP 49

Query: 272 TRRPSRFVSQCKNVVDE 322
            R  SRF  QC NVVDE
Sbjct: 50  LRPASRFACQCSNVVDE 66


>gb|EAY82500.1| hypothetical protein OsI_036459 [Oryza sativa (indica
           cultivar-group)]
          Length = 497

 Score =  195 bits (496), Expect(2) = 7e-56
 Identities = 90/105 (85%), Positives = 99/105 (94%)
 Frame = +1

Query: 343 IISSVLVADEKNWESMVVACESPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN 522
           ++  V+VADEKNW+SMV+  E+PVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN
Sbjct: 63  VVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVN 122

Query: 523 TDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLSTIID 657
           TDD PNIA+ YGIRSIPTVLMFK+GEKKESVIGAVPKTTL+TIID
Sbjct: 123 TDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIID 167



 Score = 47.4 bits (111), Expect(2) = 7e-56
 Identities = 35/77 (45%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +2

Query: 101 MALETCFRAWA-LHAPQ--AYLGSRDRLLAGXXXXXXXXXXXXXXXXXXXXXXLTAGLIT 271
           MALETCFRAWA LHAPQ  +  GSRDRLL                          A    
Sbjct: 1   MALETCFRAWATLHAPQPPSSGGSRDRLLLSGAGSSQSKPRLS-----------VASPSP 49

Query: 272 TRRPSRFVSQCKNVVDE 322
            R  SRF  QC NVVDE
Sbjct: 50  LRPASRFACQCSNVVDE 66


>ref|NP_001105330.1| thioredoxin M1 [Zea mays]
 sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplast precursor (Trx-M)
 gb|AAA92464.1| thioredoxin M
          Length = 167

 Score =  200 bits (508), Expect = 1e-49
 Identities = 93/124 (75%), Positives = 106/124 (85%)
 Frame = +1

Query: 301 VQERRGRR*PSLITIISSVLVADEKNWESMVVACESPVLVEFWAPWCGPCRMIAPVIDEL 480
           V  RR R        +  V+VADEKNW+ +V+ACE+PVLVEFWAPWCGPCRMIAPVIDEL
Sbjct: 43  VATRRPRHVCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDEL 102

Query: 481 AKEYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLSTIIDK 660
           AK+Y GKI CCKVNTDD PN+ASTYGIRSIPTVL+FK GEKKESVIGAVPK+TL+T+IDK
Sbjct: 103 AKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDK 162

Query: 661 YLGS 672
           Y+GS
Sbjct: 163 YIGS 166


>emb|CAO60900.1| unnamed protein product [Vitis vinifera]
          Length = 183

 Score =  177 bits (448), Expect = 1e-42
 Identities = 79/107 (73%), Positives = 93/107 (86%)
 Frame = +1

Query: 346 ISSVLVADEKNWESMVVACESPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNT 525
           +  V V  + +W ++V+A E+PVLVEFWAPWCGPCRMIAPVIDELAKEY GKI CCKVNT
Sbjct: 75  VDEVQVVTDSSWSNVVIASENPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIVCCKVNT 134

Query: 526 DDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLSTIIDKYL 666
           DDCPNIA+ YGIRSIPTVL FK+GE+KESVIGAVPK+TL+  I+KY+
Sbjct: 135 DDCPNIATQYGIRSIPTVLFFKNGERKESVIGAVPKSTLTATIEKYV 181