BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem123p02
         (1209 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001051773.1| Os03g0827700 [Oryza sativa (japonica cultiva...   540   e-152
sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3 >gi|18...   540   e-152
gb|EAY92428.1| hypothetical protein OsI_013661 [Oryza sativa (in...   526   e-147
dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subs...   523   e-146
gb|EAZ29144.1| hypothetical protein OsJ_012627 [Oryza sativa (ja...   466   e-129

>ref|NP_001051773.1| Os03g0827700 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF13687.1| Os03g0827700 [Oryza sativa (japonica cultivar-group)]
          Length = 723

 Score =  540 bits (1391), Expect = e-152
 Identities = 286/336 (85%), Positives = 302/336 (89%), Gaps = 6/336 (1%)
 Frame = +2

Query: 194  SPNSVLSEHAFKRLQLRXXXXXXXXXXXXXXXXXXXXVDVLGADEEGFQ------GDGEE 355
            SPNSVLSEHAFKRLQL                         G+DEEG +      GD +E
Sbjct: 22   SPNSVLSEHAFKRLQLSDEEEEEEEG-------------AYGSDEEGVEAVGGGEGDEDE 68

Query: 356  LAVARLGLPDQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMI 535
            LA+ARLGLP+QLV+TLEKRGITHLFPIQRAVLIPAL+GRDLIARAKTGTGKTLAFGIPMI
Sbjct: 69   LAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMI 128

Query: 536  KRLIEEDEGRSFRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNIQQN 715
            K+L+EED+GRS RRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYN+QQN
Sbjct: 129  KQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQN 188

Query: 716  ALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETILQQLPAE 895
            ALSRGVDVVVGTPGR+IDLINGGSLQLGEV+YLVLDEADQMLAVGFEEDVETILQQLPAE
Sbjct: 189  ALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAE 248

Query: 896  RQSMLFSATMPGWVKKLSRRYLNDPLTIDLVGDQDEKLAEGIKLYAIPLTATSKRTILSD 1075
            RQSMLFSATMPGWVKKLSRRYLN+PLTIDLVGDQDEKLAEGIKLYAIPLT+TSKRT+LSD
Sbjct: 249  RQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSD 308

Query: 1076 LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEA 1183
            LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEA
Sbjct: 309  LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEA 344


>sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3
 gb|AAL79753.1|AC096687_17 putative RNA helicase [Oryza sativa]
          Length = 758

 Score =  540 bits (1391), Expect = e-152
 Identities = 286/336 (85%), Positives = 302/336 (89%), Gaps = 6/336 (1%)
 Frame = +2

Query: 194  SPNSVLSEHAFKRLQLRXXXXXXXXXXXXXXXXXXXXVDVLGADEEGFQ------GDGEE 355
            SPNSVLSEHAFKRLQL                         G+DEEG +      GD +E
Sbjct: 57   SPNSVLSEHAFKRLQLSDEEEEEEEG-------------AYGSDEEGVEAVGGGEGDEDE 103

Query: 356  LAVARLGLPDQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMI 535
            LA+ARLGLP+QLV+TLEKRGITHLFPIQRAVLIPAL+GRDLIARAKTGTGKTLAFGIPMI
Sbjct: 104  LAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMI 163

Query: 536  KRLIEEDEGRSFRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNIQQN 715
            K+L+EED+GRS RRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYN+QQN
Sbjct: 164  KQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQN 223

Query: 716  ALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETILQQLPAE 895
            ALSRGVDVVVGTPGR+IDLINGGSLQLGEV+YLVLDEADQMLAVGFEEDVETILQQLPAE
Sbjct: 224  ALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAE 283

Query: 896  RQSMLFSATMPGWVKKLSRRYLNDPLTIDLVGDQDEKLAEGIKLYAIPLTATSKRTILSD 1075
            RQSMLFSATMPGWVKKLSRRYLN+PLTIDLVGDQDEKLAEGIKLYAIPLT+TSKRT+LSD
Sbjct: 284  RQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSD 343

Query: 1076 LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEA 1183
            LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEA
Sbjct: 344  LITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEA 379


>gb|EAY92428.1| hypothetical protein OsI_013661 [Oryza sativa (indica
            cultivar-group)]
          Length = 791

 Score =  526 bits (1354), Expect = e-147
 Identities = 286/362 (79%), Positives = 302/362 (83%), Gaps = 32/362 (8%)
 Frame = +2

Query: 194  SPNSVLSEHAFKRLQLRXXXXXXXXXXXXXXXXXXXXVDVLGADEEGFQ------GDGEE 355
            SPNSVLSEHAFKRLQL                         G+DEEG +      GD +E
Sbjct: 57   SPNSVLSEHAFKRLQLSDEEEEEEGAYGSDEEG------AYGSDEEGVEAVGGGEGDEDE 110

Query: 356  LAVARLGLPDQLVATLEKRGITHLFPIQ--------------------------RAVLIP 457
            LA+ARLGLP+QLV+TLEKRGITHLFPIQ                          RAVLIP
Sbjct: 111  LAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSVGFVGGMSSWTVRAVLIP 170

Query: 458  ALEGRDLIARAKTGTGKTLAFGIPMIKRLIEEDEGRSFRRGRIPRVLVLAPTRELAKQVE 637
            AL+GRDLIARAKTGTGKTLAFGIPMIK+L+EED+GRS RRGRIPRVLVLAPTRELAKQVE
Sbjct: 171  ALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVE 230

Query: 638  KEIKESAPKLSTVCVYGGVSYNIQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLV 817
            KEIKESAPKLSTVCVYGGVSYN+QQNALSRGVDVVVGTPGR+IDLINGGSLQLGEV+YLV
Sbjct: 231  KEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLV 290

Query: 818  LDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNDPLTIDLVGDQ 997
            LDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLN+PLTIDLVGDQ
Sbjct: 291  LDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQ 350

Query: 998  DEKLAEGIKLYAIPLTATSKRTILSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIAS 1177
            DEKLAEGIKLYAIPLT+TSKRT+LSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIAS
Sbjct: 351  DEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIAS 410

Query: 1178 EA 1183
            EA
Sbjct: 411  EA 412


>dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subsp. vulgare]
          Length = 764

 Score =  523 bits (1346), Expect = e-146
 Identities = 281/333 (84%), Positives = 294/333 (88%), Gaps = 3/333 (0%)
 Frame = +2

Query: 194  SPNSVLSEHAFKRLQLRXXXXXXXXXXXXXXXXXXXXVDVLGADEEG---FQGDGEELAV 364
            SPNSVLSEHAFKRL L                      D  G+D+EG    +GD +ELA+
Sbjct: 47   SPNSVLSEHAFKRLGLGAGSDDEDE-------------DGYGSDQEGPAAVEGDKDELAI 93

Query: 365  ARLGLPDQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKRL 544
            +RLGLP QLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIK++
Sbjct: 94   SRLGLPAQLVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQI 153

Query: 545  IEEDEGRSFRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNIQQNALS 724
            IE+DEGR+  RGRIPR LVLAPTRELAKQVEKEI ESAPKLSTVCVYGGVSYN QQNALS
Sbjct: 154  IEQDEGRTPGRGRIPRALVLAPTRELAKQVEKEIMESAPKLSTVCVYGGVSYNTQQNALS 213

Query: 725  RGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETILQQLPAERQS 904
            RGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETILQQLPAERQS
Sbjct: 214  RGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETILQQLPAERQS 273

Query: 905  MLFSATMPGWVKKLSRRYLNDPLTIDLVGDQDEKLAEGIKLYAIPLTATSKRTILSDLIT 1084
            MLFSATMP WVKKLSRRYLN+PLTIDLVGDQDEKLAEGIKL+AIPLT TSKRTILSDLIT
Sbjct: 274  MLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILSDLIT 333

Query: 1085 VYAKGGKTIVFTKTKRDADEVSLALTNSIASEA 1183
            VYAKGGKTIVFT+TKRDADEVSLALT SIASEA
Sbjct: 334  VYAKGGKTIVFTRTKRDADEVSLALTTSIASEA 366


>gb|EAZ29144.1| hypothetical protein OsJ_012627 [Oryza sativa (japonica
            cultivar-group)]
          Length = 709

 Score =  466 bits (1199), Expect = e-129
 Identities = 253/330 (76%), Positives = 270/330 (81%), Gaps = 32/330 (9%)
 Frame = +2

Query: 194  SPNSVLSEHAFKRLQLRXXXXXXXXXXXXXXXXXXXXVDVLGADEEGFQ------GDGEE 355
            SPNSVLSEHAFKRLQL                         G+DEEG +      GD +E
Sbjct: 57   SPNSVLSEHAFKRLQLSDEEEEEEEG-------------AYGSDEEGVEAVGGGEGDEDE 103

Query: 356  LAVARLGLPDQLVATLEKRGITHLFPIQ--------------------------RAVLIP 457
            LA+ARLGLP+QLV+TLEKRGITHLFPIQ                          RAVLIP
Sbjct: 104  LAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSVGFVGGMSSWTVRAVLIP 163

Query: 458  ALEGRDLIARAKTGTGKTLAFGIPMIKRLIEEDEGRSFRRGRIPRVLVLAPTRELAKQVE 637
            AL+GRDLIARAKTGTGKTLAFGIPMIK+L+EED+GRS RRGRIPRVLVLAPTRELAKQVE
Sbjct: 164  ALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVE 223

Query: 638  KEIKESAPKLSTVCVYGGVSYNIQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLV 817
            KEIKESAPKLSTVCVYGGVSYN+QQNALSRGVDVVVGTPGR+IDLINGGSLQLGEV+YLV
Sbjct: 224  KEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLV 283

Query: 818  LDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNDPLTIDLVGDQ 997
            LDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLN+PLTIDLVGDQ
Sbjct: 284  LDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQ 343

Query: 998  DEKLAEGIKLYAIPLTATSKRTILSDLITV 1087
            DEKLAEGIKLYAIPLT+TSKRT+LSDLIT+
Sbjct: 344  DEKLAEGIKLYAIPLTSTSKRTVLSDLITI 373