BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem121n18
         (1075 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   494   e-138
ref|NP_001043493.1| Os01g0600900 [Oryza sativa (japonica cultiva...   482   e-134
ref|NP_001044090.1| Os01g0720500 [Oryza sativa (japonica cultiva...   479   e-133
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   479   e-133
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   478   e-133

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII
           type I CAB-1) (LHCP)
 emb|CAA32900.1| unnamed protein product [Zea mays]
          Length = 262

 Score =  494 bits (1272), Expect = e-138
 Identities = 237/250 (94%), Positives = 242/250 (96%)
 Frame = +3

Query: 108 GTPVKVSRAALFGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 287
           GTP+KV     FGEGRITMRKT  KPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 15  GTPIKVGS---FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 71

Query: 288 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVTFGEAVWFKAG 467
           GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGV FGEAVWFKAG
Sbjct: 72  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 131

Query: 468 SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF 647
           SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF
Sbjct: 132 SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF 191

Query: 648 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 827
           DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADH+ADPVNNNA
Sbjct: 192 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNA 251

Query: 828 WAYATNFVPG 857
           WAYATNFVPG
Sbjct: 252 WAYATNFVPG 261


>ref|NP_001043493.1| Os01g0600900 [Oryza sativa (japonica cultivar-group)]
 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII
           type I CAB-2) (LHCP)
 dbj|BAD52990.1| putative a/b-binding protein precursor [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF05407.1| Os01g0600900 [Oryza sativa (japonica cultivar-group)]
 gb|EAY74827.1| hypothetical protein OsI_002674 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ44370.1| hypothetical protein OsJ_027853 [Oryza sativa (japonica
           cultivar-group)]
          Length = 261

 Score =  482 bits (1240), Expect = e-134
 Identities = 233/243 (95%), Positives = 236/243 (97%)
 Frame = +3

Query: 132 AALFGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 311
           A +FGEGRITMRK+AAKPK AASGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTA
Sbjct: 19  AKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTA 78

Query: 312 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVTFGEAVWFKAGSQIFSEGG 491
           GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV FGEAVWFKAGSQIFSEGG
Sbjct: 79  GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG 138

Query: 492 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADD 671
           LDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADD
Sbjct: 139 LDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADD 198

Query: 672 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFV 851
           PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFV
Sbjct: 199 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 258

Query: 852 PGK 860
           PGK
Sbjct: 259 PGK 261


>ref|NP_001044090.1| Os01g0720500 [Oryza sativa (japonica cultivar-group)]
 dbj|BAB84417.1| putative chlorophyll a/b-binding protein 3C precursor [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF06004.1| Os01g0720500 [Oryza sativa (japonica cultivar-group)]
 gb|EAY75641.1| hypothetical protein OsI_003488 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ13361.1| hypothetical protein OsJ_003186 [Oryza sativa (japonica
           cultivar-group)]
          Length = 265

 Score =  479 bits (1234), Expect = e-133
 Identities = 231/247 (93%), Positives = 237/247 (95%), Gaps = 1/247 (0%)
 Frame = +3

Query: 123 VSRAALFGEGRITMRKTAAKPK-VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYG 299
           V+ A +FGEGR+TMRK+AAKPK  AASGSPWYG DRV YLGP SGEPPSYLTGEFPGDYG
Sbjct: 19  VANAKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 78

Query: 300 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVTFGEAVWFKAGSQIF 479
           WDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGV FGEAVWFKAGSQIF
Sbjct: 79  WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 138

Query: 480 SEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 659
           SEGGLDYLGNPSLIHAQSILAIW CQVVLMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLG
Sbjct: 139 SEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 198

Query: 660 LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYA 839
           LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYA
Sbjct: 199 LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYA 258

Query: 840 TNFVPGK 860
           TNFVPGK
Sbjct: 259 TNFVPGK 265


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  479 bits (1233), Expect = e-133
 Identities = 226/245 (92%), Positives = 236/245 (96%)
 Frame = +3

Query: 126 SRAALFGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 305
           S + L GEGR+TMRKTA +PK  +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 23  SSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 82

Query: 306 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVTFGEAVWFKAGSQIFSE 485
           TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGV FGEAVWFKAG+QIFSE
Sbjct: 83  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 142

Query: 486 GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 665
           GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 202

Query: 666 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATN 845
           DDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATN
Sbjct: 203 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 262

Query: 846 FVPGK 860
           FVPGK
Sbjct: 263 FVPGK 267


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
 emb|CAJ77389.2| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  478 bits (1231), Expect = e-133
 Identities = 228/253 (90%), Positives = 239/253 (94%), Gaps = 2/253 (0%)
 Frame = +3

Query: 108 GTPVKVSRAA--LFGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGE 281
           G  +K+   A  + GEGR+TMRKTA KPK  +SGSPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 282 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVTFGEAVWFK 461
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGV FGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 462 AGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG 641
           AGSQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 642 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 821
           SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 822 NAWAYATNFVPGK 860
           NAW++ATNFVPGK
Sbjct: 255 NAWSFATNFVPGK 267