BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem117d14
         (1361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062572.1| Os09g0110400 [Oryza sativa (japonica cultiva...   616   e-174
emb|CAO47851.1| unnamed protein product [Vitis vinifera]              478   e-133
emb|CAN60923.1| hypothetical protein [Vitis vinifera]                 477   e-133
gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula]     475   e-132
gb|EAZ08113.1| hypothetical protein OsI_029345 [Oryza sativa (in...   462   e-128

>ref|NP_001062572.1| Os09g0110400 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD17541.1| putative DNA-directed RNA polymerase II [Oryza sativa (japonica
            cultivar-group)]
 dbj|BAF24486.1| Os09g0110400 [Oryza sativa (japonica cultivar-group)]
          Length = 330

 Score =  616 bits (1589), Expect = e-174
 Identities = 312/330 (94%), Positives = 321/330 (97%)
 Frame = +3

Query: 57   MDRPATGASYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIE 236
            M+R A G SYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIE
Sbjct: 1    MERAAGGVSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIE 60

Query: 237  VNSTVLNDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSD 416
            VNS+VLNDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSD
Sbjct: 61   VNSSVLNDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSD 120

Query: 417  QTLEVTSNDLRSTDPKVCPVDQARAYQHALGATDPYDTAAAADQRGILIVKLRRGQELKL 596
            QTLEVTSNDLRSTDPKVCPVDQARAYQHALG T+P+DTAAAADQRGILIVKLRRGQEL+L
Sbjct: 121  QTLEVTSNDLRSTDPKVCPVDQARAYQHALGGTEPFDTAAAADQRGILIVKLRRGQELRL 180

Query: 597  RAIARKGIGKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDP 776
            RAIARKGIGKDHAKWSPAATVTFMYEP+IRINEELMETLTLEEKR+ VESSPTKVF+IDP
Sbjct: 181  RAIARKGIGKDHAKWSPAATVTFMYEPEIRINEELMETLTLEEKRNLVESSPTKVFNIDP 240

Query: 777  NTQQVVVVDPEAYTYDDEVIKKADAMGKPGLIEINAKEDSFVFTVETTGAITAYELITNA 956
            NTQQVVV D EAYTYDDEVIKKADAMGKPGLIEINAKEDSF+FTVETTGAITAYELI NA
Sbjct: 241  NTQQVVVEDAEAYTYDDEVIKKADAMGKPGLIEINAKEDSFIFTVETTGAITAYELIMNA 300

Query: 957  ITVLRQKLDAVRLQDDDGDLGELGAHLVGG 1046
            ITVLRQKLDAVRLQDDD DLGELGAHLVGG
Sbjct: 301  ITVLRQKLDAVRLQDDDADLGELGAHLVGG 330


>emb|CAO47851.1| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  478 bits (1230), Expect = e-133
 Identities = 247/328 (75%), Positives = 280/328 (85%), Gaps = 4/328 (1%)
 Frame = +3

Query: 75   GASYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSTVL 254
            G SYQRFP+++IRE+KDDYAKFELR+TDASMANALRRVMIAEVPTVAIDLVEIEVNS+VL
Sbjct: 3    GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 255  NDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 434
            NDEFIAHRLGLIPLTS  AMAMRFSRDCDACDGDG CE+CSVEFHL A+   +D+TL+VT
Sbjct: 63   NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCM-TDETLDVT 121

Query: 435  SNDLRSTDPKVCPVDQARAYQHALGATDPYDTAAAADQRGILIVKLRRGQELKLRAIARK 614
            S DL S+D  V PVD           +  YD+A   D++GI+IVKLRRGQEL+LRAIARK
Sbjct: 122  SKDLISSDHTVVPVD--------FSDSSGYDSA---DKKGIIIVKLRRGQELRLRAIARK 170

Query: 615  GIGKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQQVV 794
            GIGKDHAKWSPAATVTFMYEP+I INE+LME+LTLEEK SWVESSPTKVFDID ++QQVV
Sbjct: 171  GIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVV 230

Query: 795  VVDPEAYTYDDEVIKKADAMGKPGLIEINAKEDSFVFTVETTGAITAYELITNAITVLRQ 974
            V D EAYTYDDEV+KKA+AMGKPGL+EI AKEDSF+FTVE+TGAI A +L+ NAI VL+Q
Sbjct: 231  VADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQ 290

Query: 975  KLDAVRLQDD----DGDLGELGAHLVGG 1046
            KLDAVRL +D    D   GELGAH+ GG
Sbjct: 291  KLDAVRLSEDTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein [Vitis vinifera]
          Length = 318

 Score =  477 bits (1227), Expect = e-133
 Identities = 246/328 (75%), Positives = 280/328 (85%), Gaps = 4/328 (1%)
 Frame = +3

Query: 75   GASYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSTVL 254
            G SYQRFP+++IRE+KDDYAKFELR+TDASMANALRRVMIAEVPTVAIDLVEIEVNS+VL
Sbjct: 3    GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 255  NDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 434
            NDEFIAHRLGLIPLTS  AM+MRFSRDCDACDGDG CE+CSVEFHL A+   +D+TL+VT
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCM-TDETLDVT 121

Query: 435  SNDLRSTDPKVCPVDQARAYQHALGATDPYDTAAAADQRGILIVKLRRGQELKLRAIARK 614
            S DL S+D  V PVD           +  YD+A   D++GI+IVKLRRGQEL+LRAIARK
Sbjct: 122  SKDLISSDHTVVPVD--------FSDSSGYDSA---DKKGIIIVKLRRGQELRLRAIARK 170

Query: 615  GIGKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQQVV 794
            GIGKDHAKWSPAATVTFMYEP+I INE+LME+LTLEEK SWVESSPTKVFDID ++QQVV
Sbjct: 171  GIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVV 230

Query: 795  VVDPEAYTYDDEVIKKADAMGKPGLIEINAKEDSFVFTVETTGAITAYELITNAITVLRQ 974
            V D EAYTYDDEV+KKA+AMGKPGL+EI AKEDSF+FTVE+TGAI A +L+ NAI VL+Q
Sbjct: 231  VADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQ 290

Query: 975  KLDAVRLQDD----DGDLGELGAHLVGG 1046
            KLDAVRL +D    D   GELGAH+ GG
Sbjct: 291  KLDAVRLSEDTVEADDQFGELGAHMRGG 318


>gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula]
          Length = 318

 Score =  475 bits (1223), Expect = e-132
 Identities = 244/328 (74%), Positives = 276/328 (84%), Gaps = 4/328 (1%)
 Frame = +3

Query: 75   GASYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSTVL 254
            GASY R PRV+IRELKDDY KFELRDTDAS+ANALRRVMI+EVPTVAIDLVEIEVNS+VL
Sbjct: 3    GASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVL 62

Query: 255  NDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 434
            NDEFIAHRLGLIPLTS  AMAMRFSRDCDACDGDG CEYCSVEFHL  +   +DQTL+V+
Sbjct: 63   NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCI-TDQTLDVS 121

Query: 435  SNDLRSTDPKVCPVDQARAYQHALGATDPYDTAAAADQRGILIVKLRRGQELKLRAIARK 614
            S DL S+D  V PVD               D +  +D RGI+IVKLRRGQEL+LRAIARK
Sbjct: 122  SKDLISSDHTVTPVDVPGG-----------DASIESDGRGIIIVKLRRGQELRLRAIARK 170

Query: 615  GIGKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQQVV 794
            GIGKDHAKWSPAATVTFMYEPDI INE+LME+LTLEEK+ WV+SSPT+VFDIDP TQQV+
Sbjct: 171  GIGKDHAKWSPAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVM 230

Query: 795  VVDPEAYTYDDEVIKKADAMGKPGLIEINAKEDSFVFTVETTGAITAYELITNAITVLRQ 974
            VVDPEAY+YDDEVIKKA+AMGKPGLIEI AK+DSF+FTVE+TGA+ A +L+ N+I +L+Q
Sbjct: 231  VVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQ 290

Query: 975  KLDAVRLQDD----DGDLGELGAHLVGG 1046
            KLDAVRL +D    D   GELGAH+ GG
Sbjct: 291  KLDAVRLSEDTVEADDQFGELGAHMRGG 318


>gb|EAZ08113.1| hypothetical protein OsI_029345 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ43745.1| hypothetical protein OsJ_027228 [Oryza sativa (japonica
           cultivar-group)]
          Length = 250

 Score =  462 bits (1189), Expect = e-128
 Identities = 232/249 (93%), Positives = 241/249 (96%)
 Frame = +3

Query: 57  MDRPATGASYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIE 236
           M+R A G SYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIE
Sbjct: 1   MERAAGGVSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIE 60

Query: 237 VNSTVLNDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSD 416
           VNS+VLNDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSD
Sbjct: 61  VNSSVLNDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSD 120

Query: 417 QTLEVTSNDLRSTDPKVCPVDQARAYQHALGATDPYDTAAAADQRGILIVKLRRGQELKL 596
           QTLEVTSNDLRSTDPKVCPVDQARAYQHALG T+P+DTAAAADQRGILIVKLRRGQEL+L
Sbjct: 121 QTLEVTSNDLRSTDPKVCPVDQARAYQHALGGTEPFDTAAAADQRGILIVKLRRGQELRL 180

Query: 597 RAIARKGIGKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDP 776
           RAIARKGIGKDHAKWSPAATVTFMYEP+IRINEELMETLTLEEKR+ VESSPTKVF+IDP
Sbjct: 181 RAIARKGIGKDHAKWSPAATVTFMYEPEIRINEELMETLTLEEKRNLVESSPTKVFNIDP 240

Query: 777 NTQQVVVVD 803
           NTQQ V  +
Sbjct: 241 NTQQSVTTE 249