BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem115d17
         (1068 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045624.1| Os02g0105900 [Oryza sativa (japonica cultiva...   471   e-131
ref|NP_001043015.1| Os01g0358400 [Oryza sativa (japonica cultiva...   469   e-130
sp|O22424|RS4_MAIZE 40S ribosomal protein S4 >gi|2331301|gb|AAB6...   468   e-130
gb|AAS48726.1| ribosomal protein S4 [Zea mays]                        463   e-128
gb|AAB67831.1| ribsomal protein S4 [Zea mays]                         459   e-127

>ref|NP_001045624.1| Os02g0105900 [Oryza sativa (japonica cultivar-group)]
 sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 (SCAR protein SS620)
 dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF07538.1| Os02g0105900 [Oryza sativa (japonica cultivar-group)]
 gb|EAY84111.1| hypothetical protein OsI_005344 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ21423.1| hypothetical protein OsJ_004906 [Oryza sativa (japonica
           cultivar-group)]
          Length = 265

 Score =  471 bits (1212), Expect = e-131
 Identities = 233/256 (91%), Positives = 236/256 (92%)
 Frame = +1

Query: 61  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 240
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 241 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLHSIKDEDAK 420
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRL S+KDEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120

Query: 421 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDXXXX 600
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IKANDTIKIDLETNKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 601 XXXXXXXXXXXXXXIKSREKHKGSFETIHVEDALGHQFATRLGNVFNIGKGNKPWVSLPK 780
                         IK+REKHKGSFETIHVEDALGHQFATRLGNVF IGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPK 240

Query: 781 GKGIKLSIIEEQRKRD 828
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>ref|NP_001043015.1| Os01g0358400 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF04929.1| Os01g0358400 [Oryza sativa (japonica cultivar-group)]
 gb|EAY74000.1| hypothetical protein OsI_001847 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ11863.1| hypothetical protein OsJ_001688 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa (indica cultivar-group)]
          Length = 265

 Score =  469 bits (1208), Expect = e-130
 Identities = 233/256 (91%), Positives = 235/256 (91%)
 Frame = +1

Query: 61  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 240
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 241 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLHSIKDEDAK 420
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRL S+KDEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120

Query: 421 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDXXXX 600
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 601 XXXXXXXXXXXXXXIKSREKHKGSFETIHVEDALGHQFATRLGNVFNIGKGNKPWVSLPK 780
                         IK+REKHKGSFETIHVEDALGH FATRLGNVF IGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPK 240

Query: 781 GKGIKLSIIEEQRKRD 828
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>sp|O22424|RS4_MAIZE 40S ribosomal protein S4
 gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
          Length = 265

 Score =  468 bits (1204), Expect = e-130
 Identities = 231/256 (90%), Positives = 235/256 (91%)
 Frame = +1

Query: 61  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 240
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 241 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLHSIKDEDAK 420
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKT ENYRLLYDTKGRFRLH I+DEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 421 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDXXXX 600
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 601 XXXXXXXXXXXXXXIKSREKHKGSFETIHVEDALGHQFATRLGNVFNIGKGNKPWVSLPK 780
                         IK+REKHKGSFETIHVED+LGHQFATR+GNVF IGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 781 GKGIKLSIIEEQRKRD 828
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>gb|AAS48726.1| ribosomal protein S4 [Zea mays]
          Length = 265

 Score =  463 bits (1191), Expect = e-128
 Identities = 229/256 (89%), Positives = 233/256 (91%)
 Frame = +1

Query: 61  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 240
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 241 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLHSIKDEDAK 420
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKT ENYRLLYDTKGRFRLH I+DEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 421 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDXXXX 600
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP IKANDTIKIDLETNKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPPIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 601 XXXXXXXXXXXXXXIKSREKHKGSFETIHVEDALGHQFATRLGNVFNIGKGNKPWVSLPK 780
                         IK+REKHKGS ETIHVED+LGHQFATR+GNVF IGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSLETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 781 GKGIKLSIIEEQRKRD 828
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>gb|AAB67831.1| ribsomal protein S4 [Zea mays]
          Length = 265

 Score =  459 bits (1181), Expect = e-127
 Identities = 225/256 (87%), Positives = 233/256 (91%)
 Frame = +1

Query: 61  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 240
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYAL YRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYRE 60

Query: 241 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLHSIKDEDAK 420
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKT ENYRLLYDTKGRFRLH I+DEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 421 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDXXXX 600
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKI+DFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNV 180

Query: 601 XXXXXXXXXXXXXXIKSREKHKGSFETIHVEDALGHQFATRLGNVFNIGKGNKPWVSLPK 780
                         IK+REKHKG F+TIHVED++GHQFATR+GNVF IGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGGFDTIHVEDSMGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 781 GKGIKLSIIEEQRKRD 828
           GKGIKLSIIEEQR+RD
Sbjct: 241 GKGIKLSIIEEQRRRD 256