BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem114h17
         (1210 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_996959.1| hypothetical protein LOC404608 [Danio rerio] >g...   144   2e-32
emb|CAH90594.1| hypothetical protein [Pongo pygmaeus]                 142   6e-32
ref|XP_523603.2| PREDICTED: RAD51-like 3 isoform 8 [Pan troglody...   139   5e-31
dbj|BAA25914.1| Trad [Homo sapiens]                                   139   5e-31
sp|O75771|RA51D_HUMAN DNA repair protein RAD51 homolog 4 (R51H3)...   139   5e-31

>ref|NP_996959.1| hypothetical protein LOC404608 [Danio rerio]
 gb|AAH66407.1| Zgc:77165 [Danio rerio]
          Length = 327

 Score =  144 bits (362), Expect = 2e-32
 Identities = 95/294 (32%), Positives = 150/294 (51%), Gaps = 2/294 (0%)
 Frame = +1

Query: 106 LTKEVLDSLELLEVKTVEDFIFCSVKTKSAITSVLGVEKYNTILRTLHQMFAAPKLSGWD 285
           + ++ + +L+  +++TVEDF+  + +  +   S L  +    + R L   + A  +SG D
Sbjct: 12  INEDFIKALQTEDIRTVEDFVSWNPEELAQKCS-LSYKALVAVRRVLLAQYTAYPISGAD 70

Query: 286 LYEQMMSRSTILRTGCNSLDTLLGGGLYSGEWTELVGPVSSGKTQLCLYAAMNVAWRTDG 465
           LYE+++S + IL TG  SLD LL  GLY+GE TEL G   SGKTQ+C   A+N++ +   
Sbjct: 71  LYEELLSSTAILSTGSPSLDKLLDSGLYTGEITELTGSPGSGKTQVCFSVAVNISHQLKQ 130

Query: 466 TVIYIDTGNNFSATRLLQMYKATKQQFADXXXXXXXMADVLNKVRVFQVHDIFSLLNVLD 645
           TV+YIDT     A RLLQM +       +         + L K++VF+V D+FSLL  L 
Sbjct: 131 TVVYIDTKGGMCANRLLQMLQTKTPNEQE-------QMEALQKIKVFRVFDVFSLLACLQ 183

Query: 646 QIKSMVVNKNSEFVSRAKXXXXXXXXXXXXTVI-SKNSLGHYLMVDISREIKNILVYSQM 822
            ++S  + K S      K             ++  K + G  L++ ++ E+K I     +
Sbjct: 184 NLRSTGLQKMSVGGGSVKALMVDSVSAVLSPILGGKQNEGMSLLMQVAGELKMIAKDFNI 243

Query: 823 AALTTNFTVRGGDEKEKFKPNQLKPALGEAWSHIANTQLFLHN-HNLESDNLNT 981
           A L TN   + G+        Q+K  LG +WSH+  T++ L    N E  +L T
Sbjct: 244 AVLVTNHVTKDGN-------GQVKAGLGLSWSHVPRTRVLLQRVENEEISSLRT 290


>emb|CAH90594.1| hypothetical protein [Pongo pygmaeus]
          Length = 328

 Score =  142 bits (357), Expect = 6e-32
 Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 5/285 (1%)
 Frame = +1

Query: 106 LTKEVLDSLELLEVKTVEDFIFCSVKTKSAITSVLGVEKYNTILRTLHQMFAAPKLSGWD 285
           LT+E++  L    +KTV D +   ++ + A    L  +    + R L   F+A  ++G D
Sbjct: 12  LTQEMIQLLRSRRIKTVVDLVSADLE-ELAQKCGLSYKALVALRRVLLAQFSAFPVNGAD 70

Query: 286 LYEQMMSRSTILRTGCNSLDTLLGGGLYSGEWTELVGPVSSGKTQLCLYAAMNVAWRTDG 465
           LYE++ + + IL TG  SLD LL  GLY+GE TE+VG   SGKTQ+CL  A NVA     
Sbjct: 71  LYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCVAANVAHGLQQ 130

Query: 466 TVIYIDTGNNFSATRLLQMYKATKQQFADXXXXXXXMADVLNKVRVFQVHDIFSLLNVLD 645
            V+Y+D+    +A+RLLQ+ +A  Q   +        A+ L +++V    DIF +L+VL 
Sbjct: 131 NVLYVDSNGGLTASRLLQLLQAKTQDEEE-------QAEALQRIQVVHAFDIFQMLDVLQ 183

Query: 646 QIKSMVVNKNSEFVSRAKXXXXXXXXXXXXTVIS-----KNSLGHYLMVDISREIKNILV 810
           +++  V  +    V+ +              V+S     +   G  LM+ ++RE+K +  
Sbjct: 184 ELRGTVAQQ----VTGSSGTVRVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLAR 239

Query: 811 YSQMAALTTNFTVRGGDEKEKFKPNQLKPALGEAWSHIANTQLFL 945
              MA + TN T R  D +      +LKPALG +WS + +T++ L
Sbjct: 240 DLGMAVVVTNHTTRDRDSR------RLKPALGRSWSFVPSTRILL 278


>ref|XP_523603.2| PREDICTED: RAD51-like 3 isoform 8 [Pan troglodytes]
 ref|XP_001174459.1| PREDICTED: RAD51-like 3 isoform 7 [Pan troglodytes]
          Length = 328

 Score =  139 bits (349), Expect = 5e-31
 Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 1/281 (0%)
 Frame = +1

Query: 106 LTKEVLDSLELLEVKTVEDFIFCSVKTKSAITSVLGVEKYNTILRTLHQMFAAPKLSGWD 285
           LT+E++  L    +KTV D +   ++ + A    L  +    + R L   F+A  ++G D
Sbjct: 12  LTQEMIQLLRSHRIKTVVDLVSADLE-EVAQKCGLSYKALVALRRVLLAQFSAFPVNGAD 70

Query: 286 LYEQMMSRSTILRTGCNSLDTLLGGGLYSGEWTELVGPVSSGKTQLCLYAAMNVAWRTDG 465
           LYE++ + + IL TG  SLD LL  GLY+GE TE+VG   SGKTQ+CL  A NVA     
Sbjct: 71  LYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQ 130

Query: 466 TVIYIDTGNNFSATRLLQMYKATKQQFADXXXXXXXMADVLNKVRVFQVHDIFSLLNVLD 645
            V+Y+D+    +A+RLLQ+ +A  Q   +        A+ L +++V    DIF +L+VL 
Sbjct: 131 NVLYVDSNGGLTASRLLQLLQAKTQDEEE-------QAEALRRIQVVHAFDIFQMLDVLQ 183

Query: 646 QIKSMVVNKNSEFVSRAKXXXXXXXXXXXXTVI-SKNSLGHYLMVDISREIKNILVYSQM 822
           +++  V  + +      K             ++  +   G  LM+ ++RE+K +     M
Sbjct: 184 ELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGM 243

Query: 823 AALTTNFTVRGGDEKEKFKPNQLKPALGEAWSHIANTQLFL 945
           A + TN   R  D        +LKPALG +WS + +T++ L
Sbjct: 244 AVVVTNHITRDRDS------GRLKPALGRSWSFVPSTRILL 278


>dbj|BAA25914.1| Trad [Homo sapiens]
          Length = 328

 Score =  139 bits (349), Expect = 5e-31
 Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 1/281 (0%)
 Frame = +1

Query: 106 LTKEVLDSLELLEVKTVEDFIFCSVKTKSAITSVLGVEKYNTILRTLHQMFAAPKLSGWD 285
           LT+E++  L    +KTV D +   ++ + A    L  +    + R L   F+A  ++G D
Sbjct: 12  LTEEMIQLLRSHRIKTVVDLVSADLE-EVAQKCGLSYKALVALRRVLLAQFSAFPVNGAD 70

Query: 286 LYEQMMSRSTILRTGCNSLDTLLGGGLYSGEWTELVGPVSSGKTQLCLYAAMNVAWRTDG 465
           LYE++ + + IL TG  SLD LL  GLY+GE TE+VG   SGKTQ+CL  A NVA     
Sbjct: 71  LYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQ 130

Query: 466 TVIYIDTGNNFSATRLLQMYKATKQQFADXXXXXXXMADVLNKVRVFQVHDIFSLLNVLD 645
            V+Y+D+    +A+RLLQ+ +A  Q   +        A+ L +++V    DIF +L+VL 
Sbjct: 131 NVLYVDSNGGLTASRLLQLLQAKTQDEEE-------QAEALQRIQVVHAFDIFQMLDVLQ 183

Query: 646 QIKSMVVNKNSEFVSRAKXXXXXXXXXXXXTVI-SKNSLGHYLMVDISREIKNILVYSQM 822
           +++  V  + +      K             ++  +   G  LM+ ++RE+K +     M
Sbjct: 184 ELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGM 243

Query: 823 AALTTNFTVRGGDEKEKFKPNQLKPALGEAWSHIANTQLFL 945
           A + TN   R  D        +LKPALG +WS + +T++ L
Sbjct: 244 AVVVTNHITRDRDS------GRLKPALGRSWSFVPSTRILL 278


>sp|O75771|RA51D_HUMAN DNA repair protein RAD51 homolog 4 (R51H3) (RAD51-like protein 3)
           (TRAD)
 emb|CAA75681.1| R51H3 [Homo sapiens]
 gb|AAH14422.1| RAD51-like 3 (S. cerevisiae) [Homo sapiens]
 gb|AAT38112.1| RAD51-like 3 (S. cerevisiae) [Homo sapiens]
 gb|EAW80181.1| hCG1989222, isoform CRA_b [Homo sapiens]
 gb|EAW80196.1| hCG1989222, isoform CRA_b [Homo sapiens]
 gb|ABM83244.1| RAD51-like 3 (S. cerevisiae) [synthetic construct]
 gb|ABM86446.1| RAD51-like 3 (S. cerevisiae) [synthetic construct]
          Length = 328

 Score =  139 bits (349), Expect = 5e-31
 Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 1/281 (0%)
 Frame = +1

Query: 106 LTKEVLDSLELLEVKTVEDFIFCSVKTKSAITSVLGVEKYNTILRTLHQMFAAPKLSGWD 285
           LT+E++  L    +KTV D +   ++ + A    L  +    + R L   F+A  ++G D
Sbjct: 12  LTEEMIQLLRSHRIKTVVDLVSADLE-EVAQKCGLSYKALVALRRVLLAQFSAFPVNGAD 70

Query: 286 LYEQMMSRSTILRTGCNSLDTLLGGGLYSGEWTELVGPVSSGKTQLCLYAAMNVAWRTDG 465
           LYE++ + + IL TG  SLD LL  GLY+GE TE+VG   SGKTQ+CL  A NVA     
Sbjct: 71  LYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQ 130

Query: 466 TVIYIDTGNNFSATRLLQMYKATKQQFADXXXXXXXMADVLNKVRVFQVHDIFSLLNVLD 645
            V+Y+D+    +A+RLLQ+ +A  Q   +        A+ L +++V    DIF +L+VL 
Sbjct: 131 NVLYVDSNGGLTASRLLQLLQAKTQDEEE-------QAEALRRIQVVHAFDIFQMLDVLQ 183

Query: 646 QIKSMVVNKNSEFVSRAKXXXXXXXXXXXXTVI-SKNSLGHYLMVDISREIKNILVYSQM 822
           +++  V  + +      K             ++  +   G  LM+ ++RE+K +     M
Sbjct: 184 ELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGM 243

Query: 823 AALTTNFTVRGGDEKEKFKPNQLKPALGEAWSHIANTQLFL 945
           A + TN   R  D        +LKPALG +WS + +T++ L
Sbjct: 244 AVVVTNHITRDRDS------GRLKPALGRSWSFVPSTRILL 278