BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem110b24
         (1236 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ93323.1| YABBY protein [Triticum aestivum]                      442   e-122
ref|NP_001105231.1| yabby9 protein [Zea mays] >gi|32330679|gb|AA...   424   e-117
ref|NP_001105723.1| yabby10 protein [Zea mays] >gi|32330681|gb|A...   421   e-116
sp|Q8L556|YAB3_ORYSJ Protein YABBY 3 (OsYABBY3) (OsYAB4) >gi|222...   397   e-109
ref|NP_001065021.1| Os10g0508300 [Oryza sativa (japonica cultiva...   339   2e-91

>gb|AAQ93323.1| YABBY protein [Triticum aestivum]
          Length = 297

 Score =  442 bits (1137), Expect = e-122
 Identities = 237/307 (77%), Positives = 253/307 (82%), Gaps = 12/307 (3%)
 Frame = +1

Query: 190  STSSAASAAAAFSP----EPQLAENQLPAALQLP-PVQA-APSEQLCYVHCHFCDTVLVV 351
            S+SS++ A+AAF+P    + Q+A   L + LQ P P+Q  APSEQLCYVHCHFCDTVLVV
Sbjct: 2    SSSSSSGASAAFTPVSQQQQQMAPENLSSELQPPAPMQPEAPSEQLCYVHCHFCDTVLVV 61

Query: 352  SVPSSSLFKTVTVRCGHCSSLLTVNMRGLLFPSTPTGTAATTAAVAVTTTTTTAPPPPAA 531
            SVPSSSLFKTVTVRCGHCSSLLTV+MRGLLFP+T T  AA +AA AVTTTT+   PPPAA
Sbjct: 62   SVPSSSLFKTVTVRCGHCSSLLTVDMRGLLFPTTTTTVAAESAASAVTTTTS---PPPAA 118

Query: 532  AAQGQHGQFHLPHSLNLEP-NPPHHSLLDEISSANPSLQLLEQHGLGGLIAGAGRTTAPP 708
            AA   HGQFH P SLNL P NPP HSLLDEISSANPSLQLLEQHGLGGLIA AG   A  
Sbjct: 119  AAH--HGQFHYPSSLNLAPGNPPRHSLLDEISSANPSLQLLEQHGLGGLIAAAGGRNAAA 176

Query: 709  P---PPPPAAPGKGAKATSPRTNPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH 879
            P   PPPP A GKG K  SPRTNPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH
Sbjct: 177  PAPLPPPPVAGGKGGKEPSPRTNPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH 236

Query: 880  REAFSAAAKNWAHFPHIHFGLMPDHHGLKKTSLLPQDHQRKD--GLLKDGLYAAAAAAAA 1053
            REAFSAAAKNWAHFPHIHFGLMPDH GL+KTSLLPQDHQRKD  GLLK+GLY      AA
Sbjct: 237  REAFSAAAKNWAHFPHIHFGLMPDHQGLRKTSLLPQDHQRKDGHGLLKEGLY------AA 290

Query: 1054 NMGVAPY 1074
            NMG+APY
Sbjct: 291  NMGIAPY 297


>ref|NP_001105231.1| yabby9 protein [Zea mays]
 gb|AAP79886.1| yabby9 protein [Zea mays]
          Length = 314

 Score =  424 bits (1090), Expect = e-117
 Identities = 234/319 (73%), Positives = 249/319 (78%), Gaps = 20/319 (6%)
 Frame = +1

Query: 178  ISMSSTSSAASAAAAFS-----PEPQLAENQLPAALQLPPVQAAP--SEQLCYVHCHFCD 336
            +S SS+SS++SAA  F      P P L EN L    QL PV AA   +EQLCYVHC+FCD
Sbjct: 1    MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCD 60

Query: 337  TVLVVSVPSSSLFKTVTVRCGHCSSLLTVNMRGLLFPSTPTGTAATTAA-----VAVTTT 501
            TVLVVSVP+SSLFKTVTVRCGHCSSLLTV+MRGLLFP TPT T A  A       + TTT
Sbjct: 61   TVLVVSVPTSSLFKTVTVRCGHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTT 120

Query: 502  TTTAPPPPAAAAQGQHGQFHLPHSLNLEPNPPHHSLL-DEISSA-NPSLQL-LEQHG-LG 669
            T T  PPPA +    +GQFHLPHSLN   +P H SLL DEISSA NPSLQL LEQHG LG
Sbjct: 121  TITTAPPPANSVN--NGQFHLPHSLN---HPYHQSLLVDEISSAANPSLQLQLEQHGGLG 175

Query: 670  GLIAGAGRTTAPPPPPPPAAPGKGAKATSPRTNPVVNRPPEKRQRVPSAYNRFIKDEIQR 849
            GLI G  R TA PPPP P A GKGAK  SPR NP VNRPPEKRQRVPSAYNRFIKDEIQR
Sbjct: 176  GLILGGSRNTAAPPPPQPPAAGKGAKEPSPRVNPAVNRPPEKRQRVPSAYNRFIKDEIQR 235

Query: 850  IKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHHGLKKTSLLPQDHQRKDGLLKDGLY 1029
            IKAGNP+ISHREAFSAAAKNWAHFPHIHFGLMPDH GLK TSLLPQDHQRKDGLLK+GLY
Sbjct: 236  IKAGNPNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLY 295

Query: 1030 AAAAA----AAANMGVAPY 1074
            AAAAA    AAANMG+APY
Sbjct: 296  AAAAAAAAHAAANMGIAPY 314


>ref|NP_001105723.1| yabby10 protein [Zea mays]
 gb|AAP79887.1| yabby10 protein [Zea mays]
          Length = 320

 Score =  421 bits (1081), Expect = e-116
 Identities = 235/324 (72%), Positives = 247/324 (76%), Gaps = 27/324 (8%)
 Frame = +1

Query: 184  MSSTSSAASAAAAFSPEPQL-----AENQLPAALQLPPVQAA---PSEQLCYVHCHFCDT 339
            MSS+SS++SAA  F P PQL      EN  P     PPV AA    SEQLCYVHCHFCDT
Sbjct: 1    MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDT 60

Query: 340  VLVVSVPSSSLFKTVTVRCGHCSSLLTVNMRGLLFPSTPTGTAATTA-------AVAVTT 498
            VLVVSVP+SSLFKTVTVRCGHCSSLLTVNMRGLLFP TP  TAA  A       A AVT+
Sbjct: 61   VLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAAVTS 120

Query: 499  TT---TTAPPPPAAAAQGQHGQFH-LPHSLNLE-PNPPHHS-LLDEISS-ANPSLQLLEQ 657
            TT   TTAPPPP A +   +GQFH +PHSL+L  P PPH S LLDEISS ANPSLQLLEQ
Sbjct: 121  TTATMTTAPPPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQ 180

Query: 658  HGLGGLIAGAGRTTAP-PPPPPPAAP--GKGAKATSPRTNPVVNRPPEKRQRVPSAYNRF 828
            HGLGG+I       AP P PP P AP  GKGAK  SPR N  +NRPPEKRQRVPSAYNRF
Sbjct: 181  HGLGGMITSGRNAAAPHPHPPQPQAPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRF 240

Query: 829  IKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHHGLKKTSLLPQDHQRKD- 1005
            IKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDH G KKTSLLPQDHQR D 
Sbjct: 241  IKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDG 300

Query: 1006 -GLLKDGLYAAAAAAAANMGVAPY 1074
             GLLK+GLY    AAAANMGVAPY
Sbjct: 301  GGLLKEGLY----AAAANMGVAPY 320


>sp|Q8L556|YAB3_ORYSJ Protein YABBY 3 (OsYABBY3) (OsYAB4)
 gb|AAM94935.1| putative transcription factor [Oryza sativa (japonica
            cultivar-group)]
 gb|AAM95687.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
 dbj|BAF45804.1| OsYABBY3 protein [Oryza sativa (japonica cultivar-group)]
          Length = 313

 Score =  397 bits (1020), Expect = e-109
 Identities = 226/326 (69%), Positives = 243/326 (74%), Gaps = 28/326 (8%)
 Frame = +1

Query: 181  SMSSTSSAASAAAAFSP-----EPQLAENQLPAA------LQLPPVQAAPS----EQLCY 315
            S SS+S++++AAAAF P     E Q+ E + PAA      + LPPV AA +    EQLCY
Sbjct: 3    SSSSSSASSAAAAAFRPAVVQREQQVVEEKFPAAAAAMREMVLPPVAAAAADSEQEQLCY 62

Query: 316  VHCHFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVNMRGLLFPSTPTGTAATTAAVAVT 495
            VHCH+CDTVLVVSVPSSSLF+TVTVRCGHCSSLLTVNMRGLL P        TTAA A  
Sbjct: 63   VHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLP--------TTAAAAPP 114

Query: 496  TTTTTAPPPPAAAAQGQHGQFHLPHSLNLEP-NPPHH-SLLDEISSAN-PSLQLLEQHGL 666
                  PPPP  AA       H PHSLNL P NPPHH SLLDEIS+AN P+  LLEQHGL
Sbjct: 115  PPPPPPPPPPPPAA-------HFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGL 167

Query: 667  GGLIAGAGRT------TAPPPPPPPAAPGKGA-KATSPRTNP-VVNRPPEKRQRVPSAYN 822
            GGL+A A          A   PPPP + GK A K  SPRTN  V+NRPPEKRQRVPSAYN
Sbjct: 168  GGLMASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYN 227

Query: 823  RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHHGLKKTSLLPQDHQRK 1002
            RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDH GLKKTSLLPQDHQRK
Sbjct: 228  RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDHQRK 287

Query: 1003 DGLLKDGLY--AAAAAAAANMGVAPY 1074
            DGLLK+GLY  AAAAAAAANMGVAPY
Sbjct: 288  DGLLKEGLYAAAAAAAAAANMGVAPY 313


>ref|NP_001065021.1| Os10g0508300 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF26935.1| Os10g0508300 [Oryza sativa (japonica cultivar-group)]
          Length = 310

 Score =  339 bits (870), Expect = 2e-91
 Identities = 192/263 (73%), Positives = 199/263 (75%), Gaps = 13/263 (4%)
 Frame = +1

Query: 325  HFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVNMRGLLFPSTPTGTAATTAAVAVTTTT 504
            H  D  L VSVPSSSLF+TVTVRCGHCSSLLTVNMRGLL P        TTAA A     
Sbjct: 63   HPGDHHLPVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLP--------TTAAAAPPPPP 114

Query: 505  TTAPPPPAAAAQGQHGQFHLPHSLNLEP-NPPHH-SLLDEISSAN-PSLQLLEQHGLGGL 675
               PPPP  AA       H PHSLNL P NPPHH SLLDEIS+AN P+  LLEQHGLGGL
Sbjct: 115  PPPPPPPPPAA-------HFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGL 167

Query: 676  IAGAGRT------TAPPPPPPPAAPGKGA-KATSPRTNP-VVNRPPEKRQRVPSAYNRFI 831
            +A A          A   PPPP + GK A K  SPRTN  V+NRPPEKRQRVPSAYNRFI
Sbjct: 168  MASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFI 227

Query: 832  KDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHHGLKKTSLLPQDHQRKDGL 1011
            KDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDH GLKKTSLLPQDHQRKDGL
Sbjct: 228  KDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDHQRKDGL 287

Query: 1012 LKDGLY--AAAAAAAANMGVAPY 1074
            LK+GLY  AAAAAAAANMGVAPY
Sbjct: 288  LKEGLYAAAAAAAAAANMGVAPY 310