BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem108k20 (1037 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAK97388.1|AF364304_1 succinate dehydrogenase subunit 4 [Oryz... 323 1e-86 ref|NP_001045324.1| Os01g0935900 [Oryza sativa (japonica cultiva... 305 3e-81 ref|NP_001055358.1| Os05g0372000 [Oryza sativa (japonica cultiva... 238 5e-61 gb|EAY77134.1| hypothetical protein OsI_004981 [Oryza sativa (in... 221 6e-56 gb|EAZ14757.1| hypothetical protein OsJ_004582 [Oryza sativa (ja... 205 5e-51 >gb|AAK97388.1|AF364304_1 succinate dehydrogenase subunit 4 [Oryza sativa] Length = 226 Score = 323 bits (827), Expect = 1e-86 Identities = 173/234 (73%), Positives = 193/234 (82%), Gaps = 5/234 (2%) Frame = +3 Query: 51 MASRFLTRSKALALALSRADAAAPPPLAGARCLRALSSLPRDPAAA----PSPGQPALGS 218 MASR L RSKALALALSRADAAAP P AG + LR LSSLPRDPAAA P+P QPA+GS Sbjct: 1 MASRLLARSKALALALSRADAAAPGPAAGVQWLRTLSSLPRDPAAAASPAPAPRQPAVGS 60 Query: 219 PLGLSKILGYEQTYRLSGTQVLPRWFSTGASNGSSVQQVQVSQTLPKTIAGMAQSDALKT 398 PLGLSKI GYEQT RLSGTQVLPRWFSTG SNGSS QQV + QSDAL T Sbjct: 61 PLGLSKIPGYEQTSRLSGTQVLPRWFSTGTSNGSSAQQVHNYW--------VTQSDALNT 112 Query: 399 QEGAS-KVTAFSPLEATVAKPRNSPLTSESLKVRRSELLTKVTFYIIPSLLLVSKNSFST 575 QEGA+ KV AFSPLEA++AKPR PLTSES KV+++ELLT+ T+Y+IP+LLLVSKNS ST Sbjct: 113 QEGATRKVMAFSPLEASIAKPRKGPLTSESWKVKQTELLTRSTYYMIPTLLLVSKNSIST 172 Query: 576 SLLVMSVFHQVYMFHKEIFLDYVHHEITRKWALIYFKLLLLIMAKDTIVYFDLF 737 SLLV SVFHQVYMF+KEI LDYVHH+ITRKW IYFK+LL+IMAK+T+VYFDLF Sbjct: 173 SLLVASVFHQVYMFYKEILLDYVHHDITRKWVFIYFKILLIIMAKETVVYFDLF 226 >ref|NP_001045324.1| Os01g0935900 [Oryza sativa (japonica cultivar-group)] dbj|BAB64201.1| putative succinate dehydrogenase subunit 4 [Oryza sativa (japonica cultivar-group)] dbj|BAF07238.1| Os01g0935900 [Oryza sativa (japonica cultivar-group)] Length = 211 Score = 305 bits (781), Expect = 3e-81 Identities = 165/234 (70%), Positives = 184/234 (78%), Gaps = 5/234 (2%) Frame = +3 Query: 51 MASRFLTRSKALALALSRADAAAPPPLAGARCLRALSSLPRDPAAA----PSPGQPALGS 218 MASR L RSKALALALSRADAAAP P AG + LR LSSLPRDPAAA P+P QPA+GS Sbjct: 1 MASRLLARSKALALALSRADAAAPGPAAGVQWLRTLSSLPRDPAAAASPAPAPRQPAVGS 60 Query: 219 PLGLSKILGYEQTYRLSGTQVLPRWFSTGASNGSSVQQVQVSQTLPKTIAGMAQSDALKT 398 PLGLSKI GYEQT RLSGTQVLPRWFSTG SNGSS QQ Sbjct: 61 PLGLSKIPGYEQTSRLSGTQVLPRWFSTGTSNGSSAQQ---------------------- 98 Query: 399 QEGAS-KVTAFSPLEATVAKPRNSPLTSESLKVRRSELLTKVTFYIIPSLLLVSKNSFST 575 EGA+ KV AFSPLEA++AKPR PLTSES KV+++ELLT+ T+Y+IP+LLLVSKNS ST Sbjct: 99 -EGATRKVMAFSPLEASIAKPRKGPLTSESWKVKQTELLTRSTYYMIPTLLLVSKNSIST 157 Query: 576 SLLVMSVFHQVYMFHKEIFLDYVHHEITRKWALIYFKLLLLIMAKDTIVYFDLF 737 SLLV SVFHQVYMF+KEI LDYVHH+ITRKW IYFK+LL+IMAK+T+VYFDLF Sbjct: 158 SLLVASVFHQVYMFYKEILLDYVHHDITRKWVFIYFKILLIIMAKETVVYFDLF 211 >ref|NP_001055358.1| Os05g0372000 [Oryza sativa (japonica cultivar-group)] gb|AAT58828.1| unknown protein [Oryza sativa (japonica cultivar-group)] dbj|BAF17272.1| Os05g0372000 [Oryza sativa (japonica cultivar-group)] Length = 200 Score = 238 bits (607), Expect = 5e-61 Identities = 139/229 (60%), Positives = 158/229 (68%), Gaps = 2/229 (0%) Frame = +3 Query: 51 MASRFLTRSK-ALALALSRADAAAPPPLAGARCLRALSSLPRDPAAAPSPGQPALGSPLG 227 MASR + RS+ LALALSRA A AP S P SP G Sbjct: 1 MASRLVARSRRGLALALSRAGAGAP-------------SRP---------------SPPG 32 Query: 228 LSKILGYEQTYRLSGTQVLPRWFSTGASNGSSVQQVQVSQTLPKTIAGMAQSDALKTQEG 407 L K LGYE T L G Q LP WFST ASNGS +Q+ Q + K +AGM SDALK EG Sbjct: 33 LGKTLGYEPTSHLHGAQFLPCWFSTIASNGSHMQKAQETC---KPVAGMEHSDALKVMEG 89 Query: 408 AS-KVTAFSPLEATVAKPRNSPLTSESLKVRRSELLTKVTFYIIPSLLLVSKNSFSTSLL 584 S KV AFSPLEA + KPR+SPLT ES KV+RSE+ T VTFY+IPSLL+ SKN +TS+L Sbjct: 90 TSPKVVAFSPLEAAITKPRSSPLTIESSKVKRSEIATLVTFYMIPSLLVSSKNGLATSIL 149 Query: 585 VMSVFHQVYMFHKEIFLDYVHHEITRKWALIYFKLLLLIMAKDTIVYFD 731 V +VFHQ+YMFHKEIFLDYVHH+ITRKWALIYFKLLLLIMAK+TIVYF+ Sbjct: 150 VGAVFHQIYMFHKEIFLDYVHHDITRKWALIYFKLLLLIMAKETIVYFN 198 >gb|EAY77134.1| hypothetical protein OsI_004981 [Oryza sativa (indica cultivar-group)] Length = 170 Score = 221 bits (563), Expect = 6e-56 Identities = 118/178 (66%), Positives = 135/178 (75%), Gaps = 1/178 (0%) Frame = +3 Query: 207 ALGSPLGLSKILGYEQTYRLSGTQVLPRWFSTGASNGSSVQQVQVSQTLPKTIAGMAQSD 386 A+G LS I GYEQT RLSGTQVLPRWFSTG SNGSS QQ Sbjct: 16 AVGKCYVLSLIPGYEQTSRLSGTQVLPRWFSTGTSNGSSAQQ------------------ 57 Query: 387 ALKTQEGAS-KVTAFSPLEATVAKPRNSPLTSESLKVRRSELLTKVTFYIIPSLLLVSKN 563 EGA+ KV AFSPLEA++AKPR PLTSES KV+++ELLT+ T+Y+IP+LLLVSKN Sbjct: 58 -----EGATRKVMAFSPLEASIAKPRKGPLTSESWKVKQTELLTRSTYYMIPTLLLVSKN 112 Query: 564 SFSTSLLVMSVFHQVYMFHKEIFLDYVHHEITRKWALIYFKLLLLIMAKDTIVYFDLF 737 S STSLLV SVFHQVYMF+KEI LDYVHH+ITRKW IYFK+LL+IMAK+T+VYFDLF Sbjct: 113 SISTSLLVASVFHQVYMFYKEILLDYVHHDITRKWVFIYFKILLIIMAKETVVYFDLF 170 >gb|EAZ14757.1| hypothetical protein OsJ_004582 [Oryza sativa (japonica cultivar-group)] Length = 230 Score = 205 bits (521), Expect = 5e-51 Identities = 117/179 (65%), Positives = 132/179 (73%), Gaps = 5/179 (2%) Frame = +3 Query: 51 MASRFLTRSKALALALSRADAAAPPPLAGARCLRALSSLPRDPAAA----PSPGQPALGS 218 MASR L RSKALALALSRADAAAP P AG + LR LSSLPRDPAAA P+P +PA+GS Sbjct: 1 MASRLLARSKALALALSRADAAAPGPAAGVQWLRTLSSLPRDPAAAASRAPAPRKPAVGS 60 Query: 219 PLGLSKILGYEQTYRLSGTQVLPRWFSTGASNGSSVQQVQVSQTLPKTIAGMAQSDALKT 398 P GLSKI GYEQT RLSGTQVLPRWFSTG SNGSS Q Sbjct: 61 PFGLSKIPGYEQTSRLSGTQVLPRWFSTGTSNGSSAQ----------------------- 97 Query: 399 QEGAS-KVTAFSPLEATVAKPRNSPLTSESLKVRRSELLTKVTFYIIPSLLLVSKNSFS 572 QEGA+ KV AFSPLEA++AKPR PLTSES KV+++ELLT+ T+Y+IP+LLLVSKNS + Sbjct: 98 QEGATRKVMAFSPLEASIAKPRKGPLTSESWKVKQTELLTRSTYYMIPTLLLVSKNSIN 156