BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem104g11
         (1052 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060090.1| Os07g0577600 [Oryza sativa (japonica cultiva...   359   2e-97
emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum...   356   1e-96
emb|CAA55864.1| type II LHCI [Lolium temulentum]                      353   1e-95
gb|ABK95596.1| unknown [Populus trichocarpa]                          344   6e-93
sp|P10708|CB12_LYCES Chlorophyll a-b binding protein 7, chloropl...   343   1e-92

>ref|NP_001060090.1| Os07g0577600 [Oryza sativa (japonica cultivar-group)]
 dbj|BAC83072.1| putative photosystem I antenna protein [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF22004.1| Os07g0577600 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ04452.1| hypothetical protein OsI_025684 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ40410.1| hypothetical protein OsJ_023893 [Oryza sativa (japonica
           cultivar-group)]
          Length = 263

 Score =  359 bits (921), Expect = 2e-97
 Identities = 177/248 (71%), Positives = 183/248 (73%), Gaps = 9/248 (3%)
 Frame = +3

Query: 132 LAGGAR-TSFLGGGRKLGE--------EXXXXXXXXXXXXXDRPIWFPGSVPPPWXXXXX 284
           L G AR +SFLGG  + G                       DRPIWFPGS PPPW     
Sbjct: 16  LPGAARASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSL 75

Query: 285 XXXXXXXXXXXXXXXESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILSTPSWYTAG 464
                          ESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGIL+TPSWYTAG
Sbjct: 76  PGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAG 135

Query: 465 EQQYFXXXXXXXXXXXXXXGWAEGRRWADIIKPGCVNTDPIFPSNKLTGTDVGYPGGLWF 644
           EQQYF              GWAEGRRWADIIKPGCVNTDPIFP+NKLTGTDVGYPGGLWF
Sbjct: 136 EQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWF 195

Query: 645 DPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLSDPGHAN 824
           DPLGWG+GSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL+DPGHA 
Sbjct: 196 DPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHAT 255

Query: 825 IFQAFTPK 848
           IFQAFTPK
Sbjct: 256 IFQAFTPK 263


>emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp.
           vulgare]
          Length = 255

 Score =  356 bits (914), Expect = 1e-96
 Identities = 174/243 (71%), Positives = 183/243 (75%)
 Frame = +3

Query: 120 PRNGLAGGARTSFLGGGRKLGEEXXXXXXXXXXXXXDRPIWFPGSVPPPWXXXXXXXXXX 299
           P NGLAG ARTSFLG   K                 +RPIWFPGS PPPW          
Sbjct: 16  PSNGLAG-ARTSFLGAAGKAAASRTSFAVRAAAP--ERPIWFPGSTPPPWLDGSLPGDFG 72

Query: 300 XXXXXXXXXXESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILSTPSWYTAGEQQYF 479
                     ESLRWNVQAELVHCRWAMLGAAGIFIPE LTKIGIL+TPSWYTAGEQ+YF
Sbjct: 73  FDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYF 132

Query: 480 XXXXXXXXXXXXXXGWAEGRRWADIIKPGCVNTDPIFPSNKLTGTDVGYPGGLWFDPLGW 659
                         GWAEGRRWADIIKPGCVNTDPIFP+NKLTGTDVGYPGGLWFDPLG+
Sbjct: 133 TDTTTLFIVELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGY 192

Query: 660 GSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLSDPGHANIFQAF 839
           G+GSPEK+KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL+DPGHA IF+AF
Sbjct: 193 GTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAF 252

Query: 840 TPK 848
            PK
Sbjct: 253 APK 255


>emb|CAA55864.1| type II LHCI [Lolium temulentum]
          Length = 253

 Score =  353 bits (905), Expect = 1e-95
 Identities = 173/243 (71%), Positives = 183/243 (75%)
 Frame = +3

Query: 120 PRNGLAGGARTSFLGGGRKLGEEXXXXXXXXXXXXXDRPIWFPGSVPPPWXXXXXXXXXX 299
           P NGLAG ARTSFLG G+                  +RPIWFPGS PPPW          
Sbjct: 16  PSNGLAG-ARTSFLGTGKAATRSSFTVRTAAP----ERPIWFPGSTPPPWLDGSLPGDFG 70

Query: 300 XXXXXXXXXXESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILSTPSWYTAGEQQYF 479
                     ESLRWNVQAELVHCRWAMLGAAGIFIPE LTKIGIL+TPSWYTAGEQ+YF
Sbjct: 71  FDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYF 130

Query: 480 XXXXXXXXXXXXXXGWAEGRRWADIIKPGCVNTDPIFPSNKLTGTDVGYPGGLWFDPLGW 659
                         GWAEGRRWADIIKPG VNTDPIFP+NKLTGTDVGYPGGLWFDPLG+
Sbjct: 131 TDTTTLFVVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGY 190

Query: 660 GSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLSDPGHANIFQAF 839
           G+GSPEK+KELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHL+DPGHA IF+AF
Sbjct: 191 GNGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAF 250

Query: 840 TPK 848
            PK
Sbjct: 251 APK 253


>gb|ABK95596.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  344 bits (882), Expect = 6e-93
 Identities = 159/207 (76%), Positives = 167/207 (80%)
 Frame = +3

Query: 228 DRPIWFPGSVPPPWXXXXXXXXXXXXXXXXXXXXESLRWNVQAELVHCRWAMLGAAGIFI 407
           DRP+WFPGS PPPW                    E+LRWNVQAELVHCRWAMLGAAGIFI
Sbjct: 63  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAGIFI 122

Query: 408 PEFLTKIGILSTPSWYTAGEQQYFXXXXXXXXXXXXXXGWAEGRRWADIIKPGCVNTDPI 587
           PEFLTKIGIL+TPSWYTAGE +YF              GWAEGRRWADI+KPGCVNTDPI
Sbjct: 123 PEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADILKPGCVNTDPI 182

Query: 588 FPSNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYT 767
           FP+NKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ  YT
Sbjct: 183 FPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYT 242

Query: 768 GTGPIDNLFAHLSDPGHANIFQAFTPK 848
           GTGPIDNLFAHL+DPGHA +F AFTPK
Sbjct: 243 GTGPIDNLFAHLADPGHATVFSAFTPK 269


>sp|P10708|CB12_LYCES Chlorophyll a-b binding protein 7, chloroplast precursor (LHCI type
           II CAB-7)
 emb|CAA32197.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
 gb|AAA34159.1| chlorophyll a/b-binding protein
 prf||1601518A chlorophyll a/b binding protein II
          Length = 270

 Score =  343 bits (879), Expect = 1e-92
 Identities = 169/249 (67%), Positives = 177/249 (71%), Gaps = 7/249 (2%)
 Frame = +3

Query: 123 RNG-LAGGARTSFLGGGR------KLGEEXXXXXXXXXXXXXDRPIWFPGSVPPPWXXXX 281
           RNG + G  + SFLGG R                        DRP+WFPGS PPPW    
Sbjct: 22  RNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGS 81

Query: 282 XXXXXXXXXXXXXXXXESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILSTPSWYTA 461
                           ESLRWN QAELVHCRWAMLGAAGIFIPE LTKIGIL+TPSWYTA
Sbjct: 82  LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTA 141

Query: 462 GEQQYFXXXXXXXXXXXXXXGWAEGRRWADIIKPGCVNTDPIFPSNKLTGTDVGYPGGLW 641
           GEQ+YF              GWAEGRRWADIIKPGCVNTDPIFP+NKLTGTDVGYPGGLW
Sbjct: 142 GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLW 201

Query: 642 FDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLSDPGHA 821
           FDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQ  YTGTGPIDNLFAHL+DPGHA
Sbjct: 202 FDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHA 261

Query: 822 NIFQAFTPK 848
            IF AF+PK
Sbjct: 262 TIFAAFSPK 270