BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem103b16 (1187 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001049648.1| Os03g0265400 [Oryza sativa (japonica cultiva... 537 e-151 gb|EAY89360.1| hypothetical protein OsI_010593 [Oryza sativa (in... 520 e-145 gb|AAP06837.1| unknown protein [Oryza sativa (japonica cultivar-... 520 e-145 gb|EAZ26364.1| hypothetical protein OsJ_009847 [Oryza sativa (ja... 518 e-145 ref|NP_563786.1| RPL4 (ribosomal protein L4); structural constit... 327 1e-87 >ref|NP_001049648.1| Os03g0265400 [Oryza sativa (japonica cultivar-group)] gb|ABF95133.1| 50S ribosomal protein L4, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF11562.1| Os03g0265400 [Oryza sativa (japonica cultivar-group)] Length = 323 Score = 537 bits (1383), Expect = e-151 Identities = 281/324 (86%), Positives = 295/324 (91%), Gaps = 6/324 (1%) Frame = +1 Query: 46 MPVSSVASPLLLSISSSSSPFLSSASASFLPS------SSPHAAVAAGRRKPAASVLRAL 207 M SSVAS LLLS+SSSSSPFLS S SFLPS SSP AVAAG++K A SVLRAL Sbjct: 1 MAASSVASTLLLSLSSSSSPFLSPTSVSFLPSAAAAASSSPRVAVAAGKQKAAISVLRAL 60 Query: 208 RAEAATLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRALITDRQNKRRGTASTLTRGEV 387 RAEAATLPVLSF+GEKVGEVALDLKSAPPSTARAVVHRA+ITDRQNKRRGTASTLTRGEV Sbjct: 61 RAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEV 120 Query: 388 RGGGRKPYQQKKTGKARLGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA 567 RGGGRKPYQQKKTGKAR GS RTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA Sbjct: 121 RGGGRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA 180 Query: 568 AVAEDAFVVEEFDEEFAAGPRTRDFVAALQRWGLDPKQKAMFFATEFADNVRLSGRNIGS 747 AVA+DAFVVEEFDEEFAAGP+TRDFVAALQRWGLDPK+KAMFFAT+FADNVRLSGRNIGS Sbjct: 181 AVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGS 240 Query: 748 LKMLTPRKLNLYDILDASKLFFTPAAIKYLNSRYGATVFDEYEDDTDGEDDGEEAVLEEQ 927 LKMLTPR LNLYDILDA KLFFTPAAI YLNSRYGATVFDEYEDDT+GEDDGEE EE Sbjct: 241 LKMLTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDDTNGEDDGEEEA-EEL 299 Query: 928 EEEEGTTDEAAQDETDETEADNNS 999 +E EG+ +EAAQDE ETEAD+NS Sbjct: 300 QEGEGSAEEAAQDEAAETEADSNS 323 >gb|EAY89360.1| hypothetical protein OsI_010593 [Oryza sativa (indica cultivar-group)] Length = 427 Score = 520 bits (1338), Expect = e-145 Identities = 272/313 (86%), Positives = 285/313 (91%), Gaps = 7/313 (2%) Frame = +1 Query: 46 MPVSSVASPLLLSISSSSSPFLSSASASFLPS-------SSPHAAVAAGRRKPAASVLRA 204 M SSVAS LLLS+SSSSSPFLS S SFLPS SSP AVAAG++K A SVLRA Sbjct: 1 MAASSVASTLLLSLSSSSSPFLSPTSVSFLPSAAAAASSSSPRVAVAAGKQKAAVSVLRA 60 Query: 205 LRAEAATLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRALITDRQNKRRGTASTLTRGE 384 LRAEAATLPVLSF+GEKVGEVALDLKSAPPSTARAVVHRA+ITDRQNKRRGTASTLTRGE Sbjct: 61 LRAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGE 120 Query: 385 VRGGGRKPYQQKKTGKARLGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALAS 564 VRGGGRKPYQQKKTGKAR GS RTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALAS Sbjct: 121 VRGGGRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALAS 180 Query: 565 AAVAEDAFVVEEFDEEFAAGPRTRDFVAALQRWGLDPKQKAMFFATEFADNVRLSGRNIG 744 AAVA+DAFVVEEFDEEFAAGP+TRDFVAALQRWGLDPK+KAMFFAT+FADNVRLSGRNIG Sbjct: 181 AAVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIG 240 Query: 745 SLKMLTPRKLNLYDILDASKLFFTPAAIKYLNSRYGATVFDEYEDDTDGEDDGEEAVLEE 924 SLKMLTPR LNLYDILDA KLFFTPAAI YLNSRYGATVFDEYEDDT+GEDDGEE EE Sbjct: 241 SLKMLTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDDTNGEDDGEEEA-EE 299 Query: 925 QEEEEGTTDEAAQ 963 +E EG+ +EAAQ Sbjct: 300 LQEGEGSAEEAAQ 312 >gb|AAP06837.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length = 426 Score = 520 bits (1338), Expect = e-145 Identities = 272/312 (87%), Positives = 285/312 (91%), Gaps = 6/312 (1%) Frame = +1 Query: 46 MPVSSVASPLLLSISSSSSPFLSSASASFLPS------SSPHAAVAAGRRKPAASVLRAL 207 M SSVAS LLLS+SSSSSPFLS S SFLPS SSP AVAAG++K A SVLRAL Sbjct: 1 MAASSVASTLLLSLSSSSSPFLSPTSVSFLPSAAAAASSSPRVAVAAGKQKAAISVLRAL 60 Query: 208 RAEAATLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRALITDRQNKRRGTASTLTRGEV 387 RAEAATLPVLSF+GEKVGEVALDLKSAPPSTARAVVHRA+ITDRQNKRRGTASTLTRGEV Sbjct: 61 RAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEV 120 Query: 388 RGGGRKPYQQKKTGKARLGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA 567 RGGGRKPYQQKKTGKAR GS RTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA Sbjct: 121 RGGGRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA 180 Query: 568 AVAEDAFVVEEFDEEFAAGPRTRDFVAALQRWGLDPKQKAMFFATEFADNVRLSGRNIGS 747 AVA+DAFVVEEFDEEFAAGP+TRDFVAALQRWGLDPK+KAMFFAT+FADNVRLSGRNIGS Sbjct: 181 AVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGS 240 Query: 748 LKMLTPRKLNLYDILDASKLFFTPAAIKYLNSRYGATVFDEYEDDTDGEDDGEEAVLEEQ 927 LKMLTPR LNLYDILDA KLFFTPAAI YLNSRYGATVFDEYEDDT+GEDDGEE EE Sbjct: 241 LKMLTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDDTNGEDDGEEEA-EEL 299 Query: 928 EEEEGTTDEAAQ 963 +E EG+ +EAAQ Sbjct: 300 QEGEGSAEEAAQ 311 >gb|EAZ26364.1| hypothetical protein OsJ_009847 [Oryza sativa (japonica cultivar-group)] Length = 426 Score = 518 bits (1335), Expect = e-145 Identities = 271/312 (86%), Positives = 285/312 (91%), Gaps = 6/312 (1%) Frame = +1 Query: 46 MPVSSVASPLLLSISSSSSPFLSSASASFLPS------SSPHAAVAAGRRKPAASVLRAL 207 M SSVAS LLLS+SSSSSPFLS S SFLPS SSP AVAAG++K A SVLRAL Sbjct: 1 MAASSVASTLLLSLSSSSSPFLSPTSVSFLPSAAAAASSSPRVAVAAGKQKAAISVLRAL 60 Query: 208 RAEAATLPVLSFSGEKVGEVALDLKSAPPSTARAVVHRALITDRQNKRRGTASTLTRGEV 387 RAEAATLPVLSF+GEKVGEVALDLKSAPPSTARAVVHRA+ITDRQNKRRGTASTLTRGEV Sbjct: 61 RAEAATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEV 120 Query: 388 RGGGRKPYQQKKTGKARLGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA 567 RGGGRKPYQQKKTGKAR GS RTP+RPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA Sbjct: 121 RGGGRKPYQQKKTGKARRGSMRTPVRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASA 180 Query: 568 AVAEDAFVVEEFDEEFAAGPRTRDFVAALQRWGLDPKQKAMFFATEFADNVRLSGRNIGS 747 AVA+DAFVVEEFDEEFAAGP+TRDFVAALQRWGLDPK+KAMFFAT+FADNVRLSGRNIGS Sbjct: 181 AVADDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGS 240 Query: 748 LKMLTPRKLNLYDILDASKLFFTPAAIKYLNSRYGATVFDEYEDDTDGEDDGEEAVLEEQ 927 LKMLTPR LNLYDILDA KLFFTPAAI YLNSRYGATVFDEYEDDT+GEDDGEE EE Sbjct: 241 LKMLTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDDTNGEDDGEEEA-EEL 299 Query: 928 EEEEGTTDEAAQ 963 +E EG+ +EAAQ Sbjct: 300 QEGEGSAEEAAQ 311 >ref|NP_563786.1| RPL4 (ribosomal protein L4); structural constituent of ribosome [Arabidopsis thaliana] sp|O50061|RK4_ARATH 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) gb|AAL36245.1| unknown protein [Arabidopsis thaliana] gb|AAM51392.1| unknown protein [Arabidopsis thaliana] dbj|BAE98652.1| hypothetical protein [Arabidopsis thaliana] Length = 282 Score = 327 bits (838), Expect = 1e-87 Identities = 179/288 (62%), Positives = 216/288 (75%), Gaps = 2/288 (0%) Frame = +1 Query: 55 SSVASPLLLSISSSSSPFLSSASASFLPSSSPHAA-VAAGRRKPAASVLRALRAEAATLP 231 SS +P LS SSS FLSS+ +P + + + +GR SV ++ ATLP Sbjct: 3 SSATAPNSLSFFSSSL-FLSSSHQ--IPKTYISVSKLGSGRVSKPLSV----SSQLATLP 55 Query: 232 VLSFSGEKVGEVALDLKSAPPSTARAVVHRALITDRQNKRRGTASTLTRGEVRGGGRKPY 411 +LSF GEKVGE LDLK+AP TARAVVHRA++TD NKRRGTASTLTRGEVRGGG KPY Sbjct: 56 ILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPY 115 Query: 412 QQKKTGKARLGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASAAVAED-AF 588 QKKTG AR GS RTPLRPGGGV+FGP+P+DWSIKINRKEK+LAISTAL+SAA AE A Sbjct: 116 SQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAI 175 Query: 589 VVEEFDEEFAAGPRTRDFVAALQRWGLDPKQKAMFFATEFADNVRLSGRNIGSLKMLTPR 768 VVEEF E+F P+T+DF+AA+QRWGLDPK+KAMF + +NV S RNIG+L+MLTPR Sbjct: 176 VVEEFGEKFEK-PKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPR 234 Query: 769 KLNLYDILDASKLFFTPAAIKYLNSRYGATVFDEYEDDTDGEDDGEEA 912 LNL+DIL+A KL TPAA+++LN+RYG +E +DD D + EEA Sbjct: 235 TLNLFDILNADKLVLTPAAVEFLNARYGVDAVEEEDDDEDETEGSEEA 282