BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem002j18
         (631 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001104891.1| ribosomal protein L30 [Zea mays] >gi|6094049...   228   2e-58
gb|EAY73492.1| hypothetical protein OsI_001339 [Oryza sativa (in...   224   3e-57
ref|NP_001042724.1| Os01g0276000 [Oryza sativa (japonica cultiva...   220   4e-56
ref|NP_001055897.1| Os05g0490100 [Oryza sativa (japonica cultiva...   209   1e-52
gb|EAZ34764.1| hypothetical protein OsJ_018247 [Oryza sativa (ja...   205   1e-51

>ref|NP_001104891.1| ribosomal protein L30 [Zea mays]
 sp|O48558|RL30_MAIZE 60S ribosomal protein L30
 gb|AAB88620.1| ribosomal protein L30 [Zea mays]
          Length = 112

 Score =  228 bits (582), Expect = 2e-58
 Identities = 111/112 (99%), Positives = 111/112 (99%)
 Frame = +3

Query: 93  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 272
           MVA KKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI
Sbjct: 1   MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60

Query: 273 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 428
           EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 112


>gb|EAY73492.1| hypothetical protein OsI_001339 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ11415.1| hypothetical protein OsJ_001240 [Oryza sativa (japonica
           cultivar-group)]
          Length = 136

 Score =  224 bits (571), Expect = 3e-57
 Identities = 120/170 (70%), Positives = 125/170 (73%), Gaps = 1/170 (0%)
 Frame = +3

Query: 93  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 272
           MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSK+KLVII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 273 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ*GTVPVAR 452
           EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT             
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT------------- 107

Query: 453 RMRLLSCPIHCSSCWT*FGLVY*TAFTSQPSFVGT-SFWIINFVPGLDHI 599
                                  TAFTSQP F G     + NFVPG +H+
Sbjct: 108 -----------------------TAFTSQPKFRGNIVLGLENFVPGPNHV 134


>ref|NP_001042724.1| Os01g0276000 [Oryza sativa (japonica cultivar-group)]
 sp|Q9SDG6|RL30_ORYSJ 60S ribosomal protein L30
 dbj|BAA88178.1| putative ribosomal protein L30 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF04638.1| Os01g0276000 [Oryza sativa (japonica cultivar-group)]
          Length = 111

 Score =  220 bits (561), Expect = 4e-56
 Identities = 109/112 (97%), Positives = 111/112 (99%)
 Frame = +3

Query: 93  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 272
           MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSK+KLVII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 273 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 428
           EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTT GEQ
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTT-GEQ 111


>ref|NP_001055897.1| Os05g0490100 [Oryza sativa (japonica cultivar-group)]
 gb|AAT69635.1| putative 60S ribosomal protein L30 [Oryza sativa (japonica
           cultivar-group)]
 gb|AAT77294.1| putative 60S ribosomal protein L30 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF17811.1| Os05g0490100 [Oryza sativa (japonica cultivar-group)]
          Length = 112

 Score =  209 bits (531), Expect = 1e-52
 Identities = 98/112 (87%), Positives = 103/112 (91%)
 Frame = +3

Query: 93  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 272
           M   KK KKSTDNINNKLQLVMKSGKYTLGYKTVL+TLRNSK KL+I+ANNCPPLRKSEI
Sbjct: 1   MAPTKKAKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEI 60

Query: 273 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 428
           EYYAML KV+VHHFHGNNVDLGTACGKY+RVCCLSIIDPGDSDII TTP  Q
Sbjct: 61  EYYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTPASQ 112


>gb|EAZ34764.1| hypothetical protein OsJ_018247 [Oryza sativa (japonica
           cultivar-group)]
          Length = 153

 Score =  205 bits (522), Expect = 1e-51
 Identities = 97/111 (87%), Positives = 102/111 (91%)
 Frame = +3

Query: 96  VAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIE 275
           V A   KKSTDNINNKLQLVMKSGKYTLGYKTVL+TLRNSK KL+I+ANNCPPLRKSEIE
Sbjct: 43  VVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEIE 102

Query: 276 YYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 428
           YYAML KV+VHHFHGNNVDLGTACGKY+RVCCLSIIDPGDSDII TTP  Q
Sbjct: 103 YYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTPASQ 153