BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem002b23
         (596 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056304.1| Os05g0560000 [Oryza sativa (japonica cultiva...   202   1e-50
emb|CAA36191.1| GOS5 [Oryza sativa (indica cultivar-group)]           200   5e-50
sp|P20143|PSAH_HORVU Photosystem I reaction center subunit VI, c...   180   4e-44
ref|NP_001104905.1| photosystem I complex PsaH subunit precursor...   171   3e-41
emb|CAN78973.1| hypothetical protein [Vitis vinifera] >gi|157340...   160   5e-38

>ref|NP_001056304.1| Os05g0560000 [Oryza sativa (japonica cultivar-group)]
 sp|Q0DG05|PSAH_ORYSJ Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
           (Protein GOS5)
 sp|A2Y7D9|PSAH_ORYSI Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
           (Protein GOS5)
 gb|AAC78107.1| photosystem-1 H subunit GOS5 [Oryza sativa]
 gb|AAT85106.1| light-harvesting complex I 11 kDa protein [Oryza sativa (japonica
           cultivar-group)]
 gb|AAU10639.1| 'photosystem I reaction center subunit VI,  light-harvesting
           complex I 11 kDa protein' [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF18218.1| Os05g0560000 [Oryza sativa (japonica cultivar-group)]
 gb|EAY98999.1| hypothetical protein OsI_020232 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ35254.1| hypothetical protein OsJ_018737 [Oryza sativa (japonica
           cultivar-group)]
          Length = 142

 Score =  202 bits (514), Expect = 1e-50
 Identities = 103/122 (84%), Positives = 105/122 (86%)
 Frame = +1

Query: 67  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSRALCRTTRKPRAAVVAKYGEKSVYFDLDD 246
           MASLVAVQPVAVKGLAGSSISGRKLAVRPS RALCRTTR+PRAAVVAKYGEKSVYFDL+D
Sbjct: 1   MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLED 60

Query: 247 IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASAS 426
           IGNTTGQWDLYGSDAPSPYNPLQSKFFETFA PFTKR               AYVSASAS
Sbjct: 61  IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASAS 120

Query: 427 PD 432
           PD
Sbjct: 121 PD 122


>emb|CAA36191.1| GOS5 [Oryza sativa (indica cultivar-group)]
          Length = 142

 Score =  200 bits (508), Expect = 5e-50
 Identities = 102/122 (83%), Positives = 104/122 (85%)
 Frame = +1

Query: 67  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSRALCRTTRKPRAAVVAKYGEKSVYFDLDD 246
           MASLVAVQPVAVKGLAGSSISGRKLAVRPS RALCRTTR+PRAAVVAKYGEKSVYFDL+D
Sbjct: 1   MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLED 60

Query: 247 IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASAS 426
           IGNTTGQWDLY SDAPSPYNPLQSKFFETFA PFTKR               AYVSASAS
Sbjct: 61  IGNTTGQWDLYASDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASAS 120

Query: 427 PD 432
           PD
Sbjct: 121 PD 122


>sp|P20143|PSAH_HORVU Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
 emb|CAA34218.1| 10.2 kDa photosystem I polypeptide [Hordeum vulgare]
          Length = 143

 Score =  180 bits (457), Expect = 4e-44
 Identities = 96/123 (78%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
 Frame = +1

Query: 67  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSRALCRTTRKPR-AAVVAKYGEKSVYFDLD 243
           MASLVAVQP AVKGL+GSSISGRKLAVRPSS A+ R+TR+ R AAVVAKYGEKSVYFDLD
Sbjct: 1   MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLD 60

Query: 244 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASA 423
           DI NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKR               AYVSASA
Sbjct: 61  DIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASA 120

Query: 424 SPD 432
           SPD
Sbjct: 121 SPD 123


>ref|NP_001104905.1| photosystem I complex PsaH subunit precursor [Zea mays]
 sp|O65101|PSAH_MAIZE Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
 gb|AAC26196.1| photosystem I complex PsaH subunit precursor [Zea mays]
          Length = 142

 Score =  171 bits (432), Expect = 3e-41
 Identities = 95/126 (75%), Positives = 103/126 (81%), Gaps = 4/126 (3%)
 Frame = +1

Query: 67  MASL--VAVQPVAVKGLAGSSISGRKLAV-RPSSRALCRTTRKPRAA-VVAKYGEKSVYF 234
           MASL  V+V+PVA+KGLAGSSISGRKLAV RPS+R++    R+PRAA VVAKYG+KSVYF
Sbjct: 1   MASLAAVSVKPVAIKGLAGSSISGRKLAVARPSARSI----RRPRAAAVVAKYGDKSVYF 56

Query: 235 DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVS 414
           DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKR               AYVS
Sbjct: 57  DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVS 116

Query: 415 ASASPD 432
           ASASPD
Sbjct: 117 ASASPD 122


>emb|CAN78973.1| hypothetical protein [Vitis vinifera]
 emb|CAO45890.1| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  160 bits (405), Expect = 5e-38
 Identities = 81/123 (65%), Positives = 95/123 (77%)
 Frame = +1

Query: 64  TMASLVAVQPVAVKGLAGSSISGRKLAVRPSSRALCRTTRKPRAAVVAKYGEKSVYFDLD 243
           ++A+L AVQP+ +KGLAGSSISG KL+V+P+ R+L R       AVVAKYG+KSVYFDL+
Sbjct: 3   SLATLAAVQPINIKGLAGSSISGTKLSVKPARRSL-RVGNSRAGAVVAKYGDKSVYFDLE 61

Query: 244 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASA 423
           D+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR               AYVSA+A
Sbjct: 62  DLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSVLAYVSATA 121

Query: 424 SPD 432
           S D
Sbjct: 122 SDD 124