BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bbasst002n19
         (641 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056304.1| Os05g0560000 [Oryza sativa (japonica cultiva...   200   6e-50
emb|CAA36191.1| GOS5 [Oryza sativa (indica cultivar-group)]           197   3e-49
sp|P20143|PSAH_HORVU Photosystem I reaction center subunit VI, c...   181   3e-44
ref|NP_001104905.1| photosystem I complex PsaH subunit precursor...   169   9e-41
emb|CAN78973.1| hypothetical protein [Vitis vinifera] >gi|157340...   158   3e-37

>ref|NP_001056304.1| Os05g0560000 [Oryza sativa (japonica cultivar-group)]
 sp|Q0DG05|PSAH_ORYSJ Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
           (Protein GOS5)
 sp|A2Y7D9|PSAH_ORYSI Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
           (Protein GOS5)
 gb|AAC78107.1| photosystem-1 H subunit GOS5 [Oryza sativa]
 gb|AAT85106.1| light-harvesting complex I 11 kDa protein [Oryza sativa (japonica
           cultivar-group)]
 gb|AAU10639.1| 'photosystem I reaction center subunit VI,  light-harvesting
           complex I 11 kDa protein' [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF18218.1| Os05g0560000 [Oryza sativa (japonica cultivar-group)]
 gb|EAY98999.1| hypothetical protein OsI_020232 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ35254.1| hypothetical protein OsJ_018737 [Oryza sativa (japonica
           cultivar-group)]
          Length = 142

 Score =  200 bits (508), Expect = 6e-50
 Identities = 102/122 (83%), Positives = 104/122 (85%)
 Frame = +2

Query: 74  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPRAAVVAKYGEKSVYFDLDD 253
           MASLVAVQPVAVKGLAGSSISGRKLAVRPS  ALCRTTR+PRAAVVAKYGEKSVYFDL+D
Sbjct: 1   MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLED 60

Query: 254 IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASAS 433
           IGNTTGQWDLYGSDAPSPYNPLQSKFFETFA PFTKR               AYVSASAS
Sbjct: 61  IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASAS 120

Query: 434 PD 439
           PD
Sbjct: 121 PD 122


>emb|CAA36191.1| GOS5 [Oryza sativa (indica cultivar-group)]
          Length = 142

 Score =  197 bits (502), Expect = 3e-49
 Identities = 101/122 (82%), Positives = 103/122 (84%)
 Frame = +2

Query: 74  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPRAAVVAKYGEKSVYFDLDD 253
           MASLVAVQPVAVKGLAGSSISGRKLAVRPS  ALCRTTR+PRAAVVAKYGEKSVYFDL+D
Sbjct: 1   MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLED 60

Query: 254 IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASAS 433
           IGNTTGQWDLY SDAPSPYNPLQSKFFETFA PFTKR               AYVSASAS
Sbjct: 61  IGNTTGQWDLYASDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASAS 120

Query: 434 PD 439
           PD
Sbjct: 121 PD 122


>sp|P20143|PSAH_HORVU Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
 emb|CAA34218.1| 10.2 kDa photosystem I polypeptide [Hordeum vulgare]
          Length = 143

 Score =  181 bits (459), Expect = 3e-44
 Identities = 96/123 (78%), Positives = 101/123 (82%), Gaps = 1/123 (0%)
 Frame = +2

Query: 74  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPR-AAVVAKYGEKSVYFDLD 250
           MASLVAVQP AVKGL+GSSISGRKLAVRPSS+A+ R+TR+ R AAVVAKYGEKSVYFDLD
Sbjct: 1   MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLD 60

Query: 251 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASA 430
           DI NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKR               AYVSASA
Sbjct: 61  DIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASA 120

Query: 431 SPD 439
           SPD
Sbjct: 121 SPD 123


>ref|NP_001104905.1| photosystem I complex PsaH subunit precursor [Zea mays]
 sp|O65101|PSAH_MAIZE Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
 gb|AAC26196.1| photosystem I complex PsaH subunit precursor [Zea mays]
          Length = 142

 Score =  169 bits (429), Expect = 9e-41
 Identities = 95/126 (75%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
 Frame = +2

Query: 74  MASL--VAVQPVAVKGLAGSSISGRKLAV-RPSSSALCRTTRKPRAA-VVAKYGEKSVYF 241
           MASL  V+V+PVA+KGLAGSSISGRKLAV RPS+    R+ R+PRAA VVAKYG+KSVYF
Sbjct: 1   MASLAAVSVKPVAIKGLAGSSISGRKLAVARPSA----RSIRRPRAAAVVAKYGDKSVYF 56

Query: 242 DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVS 421
           DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKR               AYVS
Sbjct: 57  DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVS 116

Query: 422 ASASPD 439
           ASASPD
Sbjct: 117 ASASPD 122


>emb|CAN78973.1| hypothetical protein [Vitis vinifera]
 emb|CAO45890.1| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  158 bits (399), Expect = 3e-37
 Identities = 80/123 (65%), Positives = 94/123 (76%)
 Frame = +2

Query: 71  TMASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPRAAVVAKYGEKSVYFDLD 250
           ++A+L AVQP+ +KGLAGSSISG KL+V+P+  +L R       AVVAKYG+KSVYFDL+
Sbjct: 3   SLATLAAVQPINIKGLAGSSISGTKLSVKPARRSL-RVGNSRAGAVVAKYGDKSVYFDLE 61

Query: 251 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRXXXXXXXXXXXXXXXAYVSASA 430
           D+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKR               AYVSA+A
Sbjct: 62  DLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSVLAYVSATA 121

Query: 431 SPD 439
           S D
Sbjct: 122 SDD 124