BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bbasst002m16
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001105390.1| acidic ribosomal protein P2b [Zea mays] >gi|...   105   2e-21
gb|EAZ34482.1| hypothetical protein OsJ_017965 [Oryza sativa (ja...   105   2e-21
gb|AAP80630.1|AF475108_1 acidic ribosomal protein [Triticum aest...   102   1e-20
ref|NP_001055683.1| Os05g0445500 [Oryza sativa (japonica cultiva...   101   4e-20
gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanu...    97   6e-19

>ref|NP_001105390.1| acidic ribosomal protein P2b [Zea mays]
 sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B
 gb|AAB71080.1| acidic ribosomal protein P2b [Zea mays]
          Length = 113

 Score =  105 bits (263), Expect = 2e-21
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = +3

Query: 96  MKVIAAYLLAVLGGNTKPTADDVKNILESVGAEADEDRLECLLAELKDKDITEVIAAGRE 275
           MKVIAAYLLAVLGGNT PTADDVK+ILESVGAEADE++LE LL ELKDKDITEVIAAGRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 276 K 278
           +
Sbjct: 61  R 61


>gb|EAZ34482.1| hypothetical protein OsJ_017965 [Oryza sativa (japonica
           cultivar-group)]
          Length = 323

 Score =  105 bits (262), Expect = 2e-21
 Identities = 62/117 (52%), Positives = 70/117 (59%)
 Frame = +3

Query: 90  FTMKVIAAYLLAVLGGNTKPTADDVKNILESVGAEADEDRLECLLAELKDKDITEVIAAG 269
           FTMK+IAAYLLAVLGGNT P+ADD+KNILESVG EA+++RLE LL+EL+ KDITEVIAAG
Sbjct: 209 FTMKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAG 268

Query: 270 REKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 440
           REKF                                           DDDMGFSLFD
Sbjct: 269 REKF--ASVPSGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEKEESDDDMGFSLFD 323



 Score =  105 bits (261), Expect = 3e-21
 Identities = 52/64 (81%), Positives = 60/64 (93%)
 Frame = +3

Query: 90  FTMKVIAAYLLAVLGGNTKPTADDVKNILESVGAEADEDRLECLLAELKDKDITEVIAAG 269
           FTMK+IAAYLLAVLGGNT P+ADD+KNILESVG EA+++RLE LL+EL+ KDITEVIAAG
Sbjct: 62  FTMKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAG 121

Query: 270 REKF 281
           REKF
Sbjct: 122 REKF 125


>gb|AAP80630.1|AF475108_1 acidic ribosomal protein [Triticum aestivum]
          Length = 138

 Score =  102 bits (255), Expect = 1e-20
 Identities = 53/66 (80%), Positives = 60/66 (90%)
 Frame = +3

Query: 84  LVFTMKVIAAYLLAVLGGNTKPTADDVKNILESVGAEADEDRLECLLAELKDKDITEVIA 263
           LV TMK+IAAYLLA LGGN+ P+A DVKNIL+SVGAEADE++LE LLAELK KDITEVIA
Sbjct: 22  LVSTMKLIAAYLLAYLGGNSSPSAADVKNILDSVGAEADEEKLEFLLAELKGKDITEVIA 81

Query: 264 AGREKF 281
           +GREKF
Sbjct: 82  SGREKF 87


>ref|NP_001055683.1| Os05g0445500 [Oryza sativa (japonica cultivar-group)]
 gb|AAU44278.1| putative 60S acidic ribosomal protein [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF17597.1| Os05g0445500 [Oryza sativa (japonica cultivar-group)]
 gb|EAY98230.1| hypothetical protein OsI_019463 [Oryza sativa (indica
           cultivar-group)]
          Length = 113

 Score =  101 bits (251), Expect = 4e-20
 Identities = 60/115 (52%), Positives = 68/115 (59%)
 Frame = +3

Query: 96  MKVIAAYLLAVLGGNTKPTADDVKNILESVGAEADEDRLECLLAELKDKDITEVIAAGRE 275
           MK+IAAYLLAVLGGNT P+ADD+KNILESVG EA+++RLE LL+EL+ KDITEVIAAGRE
Sbjct: 1   MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60

Query: 276 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 440
           KF                                           DDDMGFSLFD
Sbjct: 61  KF--ASVPSGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEKEESDDDMGFSLFD 113


>gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanum tuberosum]
          Length = 115

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 56/115 (48%), Positives = 65/115 (56%)
 Frame = +3

Query: 96  MKVIAAYLLAVLGGNTKPTADDVKNILESVGAEADEDRLECLLAELKDKDITEVIAAGRE 275
           MKVIA+YLLAVLGGNT P+A D+K IL SVGAEAD+DR+E LL+++K KDITE+IAAGRE
Sbjct: 1   MKVIASYLLAVLGGNTSPSAADLKKILASVGAEADDDRIELLLSQVKGKDITELIAAGRE 60

Query: 276 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 440
           K                                            DDDMGFSLFD
Sbjct: 61  KLASVPAGGGGGVAVAVSGGGGGGAAAPAAEEKKVEKKVEEKEESDDDMGFSLFD 115