BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bbasst002j15
         (621 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW50990.1| ribosomal protein P1 [Triticum aestivum]               113   9e-24
ref|NP_001060854.1| Os08g0116500 [Oryza sativa (japonica cultiva...   112   1e-23
gb|ABK23078.1| unknown [Picea sitchensis] >gi|116784568|gb|ABK23...   104   4e-21
ref|NP_001105701.1| acidic ribosomal protein P1a [Zea mays] >gi|...   103   7e-21
sp|P52855|RLA1_MAIZE 60S acidic ribosomal protein P1 (L12) >gi|1...   101   4e-20

>gb|AAW50990.1| ribosomal protein P1 [Triticum aestivum]
          Length = 110

 Score =  113 bits (282), Expect = 9e-24
 Identities = 66/107 (61%), Positives = 68/107 (63%)
 Frame = +2

Query: 98  VACTLAALILHDDSIPITSEKIATLVKAANIKVESYWPALFAKLLEKRSVDDLILSVGSX 277
           VACTLAALILHDD IPITSEKIAT+VKAA IKVE+YWPALFAKLLEKRSVDDLILSVGS 
Sbjct: 6   VACTLAALILHDDGIPITSEKIATVVKAAGIKVEAYWPALFAKLLEKRSVDDLILSVGS- 64

Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 418
                                               SDDDMGFSLFD
Sbjct: 65  -GGGGAPAAAAAAPAAGGAAAAEEKKEEKKEEAKEESDDDMGFSLFD 110


>ref|NP_001060854.1| Os08g0116500 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD33092.1| putative acidic ribosomal protein P1a [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF22768.1| Os08g0116500 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ05394.1| hypothetical protein OsI_026626 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ41313.1| hypothetical protein OsJ_024796 [Oryza sativa (japonica
           cultivar-group)]
          Length = 110

 Score =  112 bits (281), Expect = 1e-23
 Identities = 66/107 (61%), Positives = 67/107 (62%)
 Frame = +2

Query: 98  VACTLAALILHDDSIPITSEKIATLVKAANIKVESYWPALFAKLLEKRSVDDLILSVGSX 277
           VACTLAALILHDD IPITSEKIATLVKAANIKVE+YWP LFAKLLE RSVDDLILSVGS 
Sbjct: 6   VACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLILSVGS- 64

Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 418
                                               SDDDMGFSLFD
Sbjct: 65  -GGGAAPVAAAAAPAAGGGAAAAPAAEEKKEEAKEESDDDMGFSLFD 110


>gb|ABK23078.1| unknown [Picea sitchensis]
 gb|ABK23394.1| unknown [Picea sitchensis]
          Length = 112

 Score =  104 bits (259), Expect = 4e-21
 Identities = 56/107 (52%), Positives = 64/107 (59%)
 Frame = +2

Query: 98  VACTLAALILHDDSIPITSEKIATLVKAANIKVESYWPALFAKLLEKRSVDDLILSVGSX 277
           VACT AALIL DD IP+T EKI TLVKAAN+K+ESYWP LFAKLLEKR+++DL+LSVGS 
Sbjct: 6   VACTYAALILWDDGIPVTGEKINTLVKAANVKIESYWPGLFAKLLEKRNIEDLLLSVGSG 65

Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 418
                                               SD+DMGFSLFD
Sbjct: 66  GGGAAAPIAVAPSGGGGGAADAAPAAEEKKEEPKEESDEDMGFSLFD 112


>ref|NP_001105701.1| acidic ribosomal protein P1a [Zea mays]
 gb|AAB71079.1| acidic ribosomal protein P1a [Zea mays]
          Length = 109

 Score =  103 bits (257), Expect = 7e-21
 Identities = 61/107 (57%), Positives = 66/107 (61%)
 Frame = +2

Query: 98  VACTLAALILHDDSIPITSEKIATLVKAANIKVESYWPALFAKLLEKRSVDDLILSVGSX 277
           +ACT AALIL DD I IT+EKIAT+VKAANIKVESYWPALFAKLLEKR+V+DLILSVGS 
Sbjct: 6   LACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGS- 64

Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 418
                                               SDDDMGFSLFD
Sbjct: 65  --GGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109


>sp|P52855|RLA1_MAIZE 60S acidic ribosomal protein P1 (L12)
 gb|AAA91168.1| ribosomal protein L12
          Length = 109

 Score =  101 bits (251), Expect = 4e-20
 Identities = 60/107 (56%), Positives = 65/107 (60%)
 Frame = +2

Query: 98  VACTLAALILHDDSIPITSEKIATLVKAANIKVESYWPALFAKLLEKRSVDDLILSVGSX 277
           +AC  AALIL DD I IT+EKIAT+VKAANIKVESYWPALFAKLLEKR+V+DLILSVGS 
Sbjct: 6   LACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGS- 64

Query: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 418
                                               SDDDMGFSLFD
Sbjct: 65  --GGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109