BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bbasst002h12
         (612 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ26374.1| photosystem 1 subunit 5 [Brachypodium sylvaticum]     216   1e-54
emb|CAJ75642.1| photosystem 1 subunit 5 [Triticum aestivum]           214   3e-54
sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, ch...   213   5e-54
ref|NP_001063493.1| Os09g0481200 [Oryza sativa (japonica cultiva...   210   5e-53
emb|CAO66840.1| unnamed protein product [Vitis vinifera]              191   3e-47

>emb|CAJ26374.1| photosystem 1 subunit 5 [Brachypodium sylvaticum]
          Length = 143

 Score =  216 bits (549), Expect = 1e-54
 Identities = 113/143 (79%), Positives = 119/143 (83%)
 Frame = +2

Query: 59  MATSTAALLSPPSVAGXXXXXXXXXXXXXXXXXXTPARRSVAARAELNTSVVISLSTGLS 238
           MATSTAA+LSPPSVAG                  T ARRSVAARA L  SVVISLSTGLS
Sbjct: 1   MATSTAAVLSPPSVAGLRLAPSPRAAVSFRAAPPT-ARRSVAARAALEPSVVISLSTGLS 59

Query: 239 LFLGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEYAGLLKSNDPVGFNIVDVLAWG 418
           LFLGRFVFFNFQRENVAKQVP QNGKTHFEAGD+RAKE+AG+LKSNDPVGFNIVDVLAWG
Sbjct: 60  LFLGRFVFFNFQRENVAKQVPAQNGKTHFEAGDQRAKEFAGILKSNDPVGFNIVDVLAWG 119

Query: 419 SLGHIVAYYILATCSNGYDPNFF 487
           S+GHIVAYYILAT SNGYDP+FF
Sbjct: 120 SIGHIVAYYILATTSNGYDPSFF 142


>emb|CAJ75642.1| photosystem 1 subunit 5 [Triticum aestivum]
          Length = 143

 Score =  214 bits (545), Expect = 3e-54
 Identities = 111/143 (77%), Positives = 119/143 (83%)
 Frame = +2

Query: 59  MATSTAALLSPPSVAGXXXXXXXXXXXXXXXXXXTPARRSVAARAELNTSVVISLSTGLS 238
           MATSTAA+LSPP+VAG                  +PARRSVAARA L  SVVISLSTGLS
Sbjct: 1   MATSTAAVLSPPTVAGLRLAPSHRAAVSFRGAS-SPARRSVAARAALEPSVVISLSTGLS 59

Query: 239 LFLGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEYAGLLKSNDPVGFNIVDVLAWG 418
           L +GRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKE+AG+LKSNDPVGFN+VDVLAWG
Sbjct: 60  LVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWG 119

Query: 419 SLGHIVAYYILATCSNGYDPNFF 487
           S+GHIVAYYILAT SNGYDP FF
Sbjct: 120 SIGHIVAYYILATTSNGYDPPFF 142


>sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, chloroplast precursor
           (PSI-G) (Photosystem I 9 kDa protein)
 emb|CAA42727.1| photosystem I polypeptide PSI-G precursor [Hordeum vulgare]
          Length = 143

 Score =  213 bits (543), Expect = 5e-54
 Identities = 111/143 (77%), Positives = 118/143 (82%)
 Frame = +2

Query: 59  MATSTAALLSPPSVAGXXXXXXXXXXXXXXXXXXTPARRSVAARAELNTSVVISLSTGLS 238
           MATSTAA+LSPP+VAG                   PARRSVAARA L  SVVISLSTGLS
Sbjct: 1   MATSTAAVLSPPAVAGLRLAPSPRAAASFRGVSP-PARRSVAARAALEPSVVISLSTGLS 59

Query: 239 LFLGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEYAGLLKSNDPVGFNIVDVLAWG 418
           L +GRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKE+AG+LKSNDPVGFN+VDVLAWG
Sbjct: 60  LVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWG 119

Query: 419 SLGHIVAYYILATCSNGYDPNFF 487
           S+GHIVAYYILAT SNGYDP FF
Sbjct: 120 SIGHIVAYYILATTSNGYDPPFF 142


>ref|NP_001063493.1| Os09g0481200 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD33396.1| putative Photosystem I reaction center subunit V [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAD46343.1| putative Photosystem I reaction center subunit V [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF25407.1| Os09g0481200 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ09514.1| hypothetical protein OsI_030746 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ45139.1| hypothetical protein OsJ_028622 [Oryza sativa (japonica
           cultivar-group)]
          Length = 141

 Score =  210 bits (534), Expect = 5e-53
 Identities = 107/139 (76%), Positives = 116/139 (83%), Gaps = 1/139 (0%)
 Frame = +2

Query: 74  AALLSPPSVAGXXXXXXXXXXXXXXXXXXTPARR-SVAARAELNTSVVISLSTGLSLFLG 250
           A  LSPP+VAG                   PARR SVAARAEL+ S+VISLSTG+SLFLG
Sbjct: 3   ATSLSPPTVAGLRLAPSPRVRSPSVAFRAAPARRRSVAARAELSPSLVISLSTGVSLFLG 62

Query: 251 RFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEYAGLLKSNDPVGFNIVDVLAWGSLGH 430
           RFVFFNFQRENVAKQVPEQNGKTHF+AGDERAKE+AGLL+SNDPVGFN+VDVLAWGSLGH
Sbjct: 63  RFVFFNFQRENVAKQVPEQNGKTHFDAGDERAKEFAGLLRSNDPVGFNLVDVLAWGSLGH 122

Query: 431 IVAYYILATCSNGYDPNFF 487
           IVAYYILATCSNGY+PNFF
Sbjct: 123 IVAYYILATCSNGYNPNFF 141


>emb|CAO66840.1| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  191 bits (484), Expect = 3e-47
 Identities = 93/108 (86%), Positives = 97/108 (89%)
 Frame = +2

Query: 164 PARRSVAARAELNTSVVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGKTHFEAGDER 343
           P R +   RAELNTS+VISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG THFEAGD R
Sbjct: 53  PKRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSR 112

Query: 344 AKEYAGLLKSNDPVGFNIVDVLAWGSLGHIVAYYILATCSNGYDPNFF 487
           AKEY  LLKSNDPVGFNIVDVLAWGS+GHIVAYYILAT SNGYDP FF
Sbjct: 113 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 160