BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bbasst002a17
         (669 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056304.1| Os05g0560000 [Oryza sativa (japonica cultiva...   272   1e-71
emb|CAA36191.1| GOS5 [Oryza sativa (indica cultivar-group)]           266   6e-70
sp|P20143|PSAH_HORVU Photosystem I reaction center subunit VI, c...   252   1e-65
ref|NP_001104905.1| photosystem I complex PsaH subunit precursor...   242   1e-62
emb|CAN78973.1| hypothetical protein [Vitis vinifera] >gi|157340...   230   5e-59

>ref|NP_001056304.1| Os05g0560000 [Oryza sativa (japonica cultivar-group)]
 sp|Q0DG05|PSAH_ORYSJ Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
           (Protein GOS5)
 sp|A2Y7D9|PSAH_ORYSI Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
           (Protein GOS5)
 gb|AAC78107.1| photosystem-1 H subunit GOS5 [Oryza sativa]
 gb|AAT85106.1| light-harvesting complex I 11 kDa protein [Oryza sativa (japonica
           cultivar-group)]
 gb|AAU10639.1| 'photosystem I reaction center subunit VI,  light-harvesting
           complex I 11 kDa protein' [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF18218.1| Os05g0560000 [Oryza sativa (japonica cultivar-group)]
 gb|EAY98999.1| hypothetical protein OsI_020232 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ35254.1| hypothetical protein OsJ_018737 [Oryza sativa (japonica
           cultivar-group)]
          Length = 142

 Score =  272 bits (695), Expect = 1e-71
 Identities = 135/142 (95%), Positives = 138/142 (97%)
 Frame = +1

Query: 67  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPRAAVVAKYGEKSVYFDLDD 246
           MASLVAVQPVAVKGLAGSSISGRKLAVRPS  ALCRTTR+PRAAVVAKYGEKSVYFDL+D
Sbjct: 1   MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLED 60

Query: 247 IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSASAS 426
           IGNTTGQWDLYGSDAPSPYNPLQSKFFETFA PFTKRGLLLKFLLLGGGSL+AYVSASAS
Sbjct: 61  IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASAS 120

Query: 427 PDLLPIKKGPQLPPQPGPRGKI 492
           PDLLPIKKGPQLPP PGPRGKI
Sbjct: 121 PDLLPIKKGPQLPPTPGPRGKI 142


>emb|CAA36191.1| GOS5 [Oryza sativa (indica cultivar-group)]
          Length = 142

 Score =  266 bits (681), Expect = 6e-70
 Identities = 132/142 (92%), Positives = 136/142 (95%)
 Frame = +1

Query: 67  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPRAAVVAKYGEKSVYFDLDD 246
           MASLVAVQPVAVKGLAGSSISGRKLAVRPS  ALCRTTR+PRAAVVAKYGEKSVYFDL+D
Sbjct: 1   MASLVAVQPVAVKGLAGSSISGRKLAVRPSPRALCRTTRRPRAAVVAKYGEKSVYFDLED 60

Query: 247 IGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSASAS 426
           IGNTTGQWDLY SDAPSPYNPLQSKFFETFA PFTKRGLLLKFLLLGGGSL+AYVSASAS
Sbjct: 61  IGNTTGQWDLYASDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASAS 120

Query: 427 PDLLPIKKGPQLPPQPGPRGKI 492
           PDLLPIKKGP +PP PGPRGKI
Sbjct: 121 PDLLPIKKGPHVPPTPGPRGKI 142


>sp|P20143|PSAH_HORVU Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
 emb|CAA34218.1| 10.2 kDa photosystem I polypeptide [Hordeum vulgare]
          Length = 143

 Score =  252 bits (644), Expect = 1e-65
 Identities = 128/143 (89%), Positives = 135/143 (94%), Gaps = 1/143 (0%)
 Frame = +1

Query: 67  MASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPR-AAVVAKYGEKSVYFDLD 243
           MASLVAVQP AVKGL+GSSISGRKLAVRPSS+A+ R+TR+ R AAVVAKYGEKSVYFDLD
Sbjct: 1   MASLVAVQPAAVKGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLD 60

Query: 244 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSASA 423
           DI NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKRGLLLKFLL+GGGSL+AYVSASA
Sbjct: 61  DIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASA 120

Query: 424 SPDLLPIKKGPQLPPQPGPRGKI 492
           SPDLLPIKKGPQLPP PGPRGKI
Sbjct: 121 SPDLLPIKKGPQLPPTPGPRGKI 143


>ref|NP_001104905.1| photosystem I complex PsaH subunit precursor [Zea mays]
 sp|O65101|PSAH_MAIZE Photosystem I reaction center subunit VI, chloroplast precursor
           (PSI-H) (Light-harvesting complex I 11 kDa protein)
 gb|AAC26196.1| photosystem I complex PsaH subunit precursor [Zea mays]
          Length = 142

 Score =  242 bits (618), Expect = 1e-62
 Identities = 129/146 (88%), Positives = 136/146 (93%), Gaps = 4/146 (2%)
 Frame = +1

Query: 67  MASL--VAVQPVAVKGLAGSSISGRKLAV-RPSSSALCRTTRKPRAA-VVAKYGEKSVYF 234
           MASL  V+V+PVA+KGLAGSSISGRKLAV RPS+    R+ R+PRAA VVAKYG+KSVYF
Sbjct: 1   MASLAAVSVKPVAIKGLAGSSISGRKLAVARPSA----RSIRRPRAAAVVAKYGDKSVYF 56

Query: 235 DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVS 414
           DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVS
Sbjct: 57  DLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVS 116

Query: 415 ASASPDLLPIKKGPQLPPQPGPRGKI 492
           ASASPDLLPIKKGPQ PPQPGPRGKI
Sbjct: 117 ASASPDLLPIKKGPQEPPQPGPRGKI 142


>emb|CAN78973.1| hypothetical protein [Vitis vinifera]
 emb|CAO45890.1| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  230 bits (587), Expect = 5e-59
 Identities = 113/143 (79%), Positives = 128/143 (89%)
 Frame = +1

Query: 64  TMASLVAVQPVAVKGLAGSSISGRKLAVRPSSSALCRTTRKPRAAVVAKYGEKSVYFDLD 243
           ++A+L AVQP+ +KGLAGSSISG KL+V+P+  +L R       AVVAKYG+KSVYFDL+
Sbjct: 3   SLATLAAVQPINIKGLAGSSISGTKLSVKPARRSL-RVGNSRAGAVVAKYGDKSVYFDLE 61

Query: 244 DIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSASA 423
           D+GNTTGQWD+YGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGS+LAYVSA+A
Sbjct: 62  DLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSVLAYVSATA 121

Query: 424 SPDLLPIKKGPQLPPQPGPRGKI 492
           S D LPIKKGPQLPPQPGPRGKI
Sbjct: 122 SDDYLPIKKGPQLPPQPGPRGKI 144